RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 AFMP43652 599 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 NDUFA8P51970 172 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TAP1Q03518 808 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZNF568Q3ZCX4 644 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HERC4Q5GLZ8 1057 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GLB1LQ6UWU2 654 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 STXBP4Q6ZWJ1 553 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HAUS6Q7Z4H7 955 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CDR2LQ86X02 465 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 DEFB123Q8N688 67 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TMEM161BQ8NDZ6 487 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 URGCPQ8TCY9 931 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZNF689Q96CS4 500 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 DNAJC19Q96DA6 116 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 NTPCRQ9BSD7 190 aaKnown RBP12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 APOL6Q9BWW8 343 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 EIF2AQ9BY44 585 aaKnown RBP12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TRIM9Q9C026 710 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TMEM117Q9H0C3 514 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PDZD7Q9H5P4 517 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RSAD1Q9HA92 442 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 IPPQ9Y573 584 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PLXNA4Q9HCM2 1894 aa12.08□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FAM237AA0A1B0GTK4 181 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 A0A1B0GUA9 196 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ACTN4O43707 911 aaKnown RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZNF623O75123 536 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GCNT3O95395 438 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ATF7P17544 494 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 NMT1P30419 496 aaKnown RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CTNNB1P35222 781 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 LIG4P49917 911 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GATMP50440 423 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 COASYQ13057 564 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ALCAMQ13740 583 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 Q7L0L9 218 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HELQQ8TDG4 1101 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ARNTL2Q8WYA1 636 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 LPPQ93052 612 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CCDC47Q96A33 483 aaKnown RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HVCN1Q96D96 273 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RPS6KC1Q96S38 1066 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TCHPQ9BT92 498 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TTYH1Q9H313 450 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GOLPH3LQ9H4A5 285 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RC3H2Q9HBD1 1191 aaKnown RBP12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ANKFY1Q9P2R3 1169 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TNFSF13BQ9Y275 285 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 INPP5FQ9Y2H2 1132 aa12.07□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ATG2AQ2TAZ0 1938 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HNRNPDLO14979 420 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZNF202O95125 648 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 EDN1P05305 212 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MYL1P05976 194 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HARSP12081 509 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ERVK-21P61565 698 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 NOLC1Q14978 699 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 NT5DC1Q5TFE4 455 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 KANK3Q6NY19 840 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MPZL3Q6UWV2 235 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZPBP2Q6X784 338 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 UNC13DQ70J99 1090 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TAS1R3Q7RTX0 852 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CRIPAKQ8N1N5 446 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FBXO22Q8NEZ5 403 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ACO2Q99798 780 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TARS2Q9BW92 718 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 BLZF1Q9H2G9 400 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ST6GALNAC4Q9H4F1 302 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CERS4Q9HA82 394 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 OLFML3Q9NRN5 406 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 EXOC1Q9NV70 894 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TBC1D7Q9P0N9 293 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PARP2Q9UGN5 583 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TBX20Q9UMR3 447 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 EXOC7Q9UPT5 735 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 USP20Q9Y2K6 914 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GIT1Q9Y2X7 761 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HES2Q9Y543 173 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RANBP2P49792 3224 aaKnown RBP12.06□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZMYM2Q9UBW7 1377 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CARNS1A5YM72 827 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TTLL13PA6NNM8 815 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TOM1L1O75674 476 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 LAG3P18627 525 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms