RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 STX8Q9UNK0 236 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 KCPQ6ZWJ8 1503 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 MYOCOSA0A1B0GUC4 107 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 MAP3K7O43318 606 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 THAP12O43422 761 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 MESDQ14696 234 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 GRHL1Q9NZI5 618 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 GLI3P10071 1580 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 CLIC2O15247 247 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 DLATP10515 647 aaKnown RBP15.43■□□□□ 0.06
CDT1-201ENST00000301019 TAC1P20366 129 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 ZDHHC14Q8IZN3 488 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 CKAP2Q8WWK9 683 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 SPATA16Q9BXB7 569 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 VCX3BQ9H321 246 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 VCX3AQ9NNX9 186 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 CTTNBP2NLQ9P2B4 639 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 BCL9O00512 1426 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 RBM47A0AV96 593 aaKnown RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 GYG2O15488 501 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 KRT18P05783 430 aaKnown RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 GNAT2P19087 354 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 MARK3P27448 753 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 MAPK7Q13164 816 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 SHKBP1Q8TBC3 707 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 ELMO3Q96BJ8 720 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 FAM161BQ96MY7 647 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 PYM1Q9BRP8 204 aaKnown RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 PHF24Q9UPV7 400 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 HERC4Q5GLZ8 1057 aaPredicted RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 SPATA24Q86W54 205 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 PRPF31Q8WWY3 499 aaKnown RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 CADM1Q9BY67 442 aaKnown RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 DCLRE1BQ9H816 532 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 PCDHA6Q9UN73 950 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 PCDHB13Q9Y5F0 798 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 PCDHA8Q9Y5H6 950 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.42■□□□□ 0.06
CDT1-201ENST00000301019 PCNTO95613 3336 aa15.42■□□□□ 0.06
CDT1-201ENST00000301019 DNAJC6O75061 913 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 NUDT17P0C025 328 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 PYGMP11217 842 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 CCNB1P14635 433 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 ATP6V1B1P15313 513 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 POLGP54098 1239 aaPredicted RBP15.41■□□□□ 0.06
CDT1-201ENST00000301019 COG7P83436 770 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 CALCOCO2Q13137 446 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 PAOXQ6QHF9 649 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 NSMFQ6X4W1 530 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 CFAP61Q8NHU2 1237 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 PAPPAQ13219 1627 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 EXOC3O60645 756 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 CIAO1O76071 339 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 UCHL3P15374 230 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 PIK3CAP42336 1068 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 WDR72Q3MJ13 1102 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 EPM2AIP1Q7L775 607 aaPredicted RBP15.41■□□□□ 0.06
CDT1-201ENST00000301019 TTC7BQ86TV6 843 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 MYOCDQ8IZQ8 938 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 ARHGAP18Q8N392 663 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 THAP2Q9H0W7 228 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 DDX3XO00571 662 aaKnown RBP eCLIP15.41■□□□□ 0.064e-26■■■□□ 15.1
CDT1-201ENST00000301019 OR52Z1P0C646 297 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 KRT15P19012 456 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 GJC1P36383 396 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 MAGEA8P43361 318 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 CCNG1P51959 295 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 WDR4P57081 412 aaKnown RBP15.41■□□□□ 0.06
CDT1-201ENST00000301019 AMPD3Q01432 767 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 C4orf50Q6ZRC1 276 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 ZBTB46Q86UZ6 589 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 LRMDAQ9H2I8 198 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 UBR2Q8IWV8 1755 aa15.41■□□□□ 0.06
CDT1-201ENST00000301019 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 MAPK13O15264 365 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 CHRNB2P17787 502 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 PTENP60484 403 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 ZCWPW2Q504Y3 356 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 DUS1LQ6P1R4 473 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 IRF2BP2Q7Z5L9 587 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 MAP7D3Q8IWC1 876 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 AGGF1Q8N302 714 aaeCLIP15.4■□□□□ 0.06
CDT1-201ENST00000301019 RDH13Q8NBN7 331 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 PTPRN2Q92932 1015 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 IFT43Q96FT9 208 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 TXLNGYQ9BZA5 131 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 DHX36Q9H2U1 1008 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 ARL8BQ9NVJ2 186 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 PRKAG3Q9UGI9 489 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 DOLKQ9UPQ8 538 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 MYH4Q9Y623 1939 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 RNASEH1O60930 286 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 PDE8BO95263 885 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 NAPAP54920 295 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 FKBP3Q00688 224 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 POU5F1Q01860 360 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms