RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 PAXIP1Q6ZW49 1069 aaPredicted RBP6.65□□□□□ -1.35
VCAM1-201ENST00000294728 INTS8Q75QN2 995 aaKnown RBP6.65□□□□□ -1.35
VCAM1-201ENST00000294728 NELFCDQ8IXH7 590 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 MAB21L3Q8N8X9 362 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 MAGOHBQ96A72 148 aaKnown RBP6.65□□□□□ -1.35
VCAM1-201ENST00000294728 HVCN1Q96D96 273 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 HOOK2Q96ED9 719 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 EIF2AK1Q9BQI3 630 aaKnown RBP6.65□□□□□ -1.35
VCAM1-201ENST00000294728 WDR11Q9BZH6 1224 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 TMEM206Q9H813 350 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 PPCSQ9HAB8 311 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 EBF2Q9HAK2 575 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 LGALS13Q9UHV8 139 aa6.65□□□□□ -1.35
VCAM1-201ENST00000294728 PACSIN2Q9UNF0 486 aaPredicted RBP6.65□□□□□ -1.35
VCAM1-201ENST00000294728 NOVA2Q9UNW9 492 aaKnown RBP6.65□□□□□ -1.35
VCAM1-201ENST00000294728 RPL26L1Q9UNX3 145 aaKnown RBP6.65□□□□□ -1.35
VCAM1-201ENST00000294728 RPTORQ8N122 1335 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 NDC80O14777 642 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PPEF1O14829 653 aaPredicted RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 ITGA4P13612 1032 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 SCP2P22307 547 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 RDXP35241 583 aaKnown RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 GPC5P78333 572 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 RASA3Q14644 834 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 DRAP1Q14919 205 aaPredicted RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 KRT71Q3SY84 523 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 EPC2Q52LR7 807 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PPP1R2P3Q6NXS1 205 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 TLDC1Q6P9B6 456 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 OTOP1Q7RTM1 612 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 LRRC47Q8N1G4 583 aaKnown RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 RIBC1Q8N443 379 aaPredicted RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 SUPT20HQ8NEM7 779 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 UBLCP1Q8WVY7 318 aaPredicted RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 GRAMD1AQ96CP6 724 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 CCDC114Q96M63 670 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 AGPAT1Q99943 283 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PHACTR1Q9C0D0 580 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 INTS2Q9H0H0 1204 aaKnown RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 GPCPD1Q9NPB8 672 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 BATF3Q9NR55 127 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 HOMER3Q9NSC5 361 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 DONSONQ9NYP3 566 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 POLLQ9UGP5 575 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 DBR1Q9UK59 544 aaKnown RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 DNAJC12Q9UKB3 198 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 AJAP1Q9UKB5 411 aaPredicted RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PPP1R9AQ9ULJ8 1098 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 FRMD4BQ9Y2L6 1034 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 NPHP3-ACAD11A0A0J9YXS1 232 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 GTF2H1P32780 548 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 FLT3P36888 993 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PDE6CP51160 858 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 CETN1Q12798 172 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 BFSP1Q12934 665 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 RHBDF2Q6PJF5 856 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 FBXO11Q86XK2 927 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 SH3TC2Q8TF17 1288 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 U2AF1L4Q8WU68 220 aaKnown RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 IWS1Q96ST2 819 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 RIT2Q99578 217 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PLVAPQ9BX97 442 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 CXorf56Q9H5V9 222 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 DDX4Q9NQI0 724 aaKnown RBP6.64□□□□□ -1.35
VCAM1-201ENST00000294728 AGPAT3Q9NRZ7 376 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 HAUS2Q9NVX0 235 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PI4KBQ9UBF8 816 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 MTUS1Q9ULD2 1270 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 ZNRF3Q9ULT6 936 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 COQ4Q9Y3A0 265 aa6.64□□□□□ -1.35
VCAM1-201ENST00000294728 PCNTO95613 3336 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 SPDYE3A6NKU9 549 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 ANKRD65E5RJM6 399 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 FAM86B1E9PN63 330 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 LIN7AO14910 233 aaPredicted RBP6.63□□□□□ -1.35
VCAM1-201ENST00000294728 FSCN2O14926 492 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 GJB6O95452 261 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 FAM86B2P0C5J1 330 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 ERCC3P19447 782 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 ITIH2P19823 946 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 ABCD1P33897 745 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 CBLBQ13191 982 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 MKRN4PQ13434 485 aaPredicted RBP6.63□□□□□ -1.35
VCAM1-201ENST00000294728 CRYMQ14894 314 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 SIX1Q15475 284 aaPredicted RBP6.63□□□□□ -1.35
VCAM1-201ENST00000294728 QPCTQ16769 361 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
VCAM1-201ENST00000294728 TTBK2Q6IQ55 1244 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 APOBEC3HQ6NTF7 200 aaKnown RBP6.63□□□□□ -1.35
VCAM1-201ENST00000294728 RGS9BPQ6ZS82 235 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 REM2Q8IYK8 340 aaPredicted RBP6.63□□□□□ -1.35
VCAM1-201ENST00000294728 FAM71AQ8IYT1 594 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 PRELID2Q8N945 189 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 BBOF1Q8ND07 529 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 AP1M1Q9BXS5 423 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 MAF1Q9H063 256 aa6.63□□□□□ -1.35
VCAM1-201ENST00000294728 PPANQ9NQ55 473 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms