RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 CYGBQ8WWM9 190 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 POLD4Q9HCU8 107 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 PSD3Q9NYI0 1048 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 TCEA2Q15560 299 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
SLX4-201ENST00000294008 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 AHCYL2Q96HN2 611 aaKnown RBP13.16□□□□□ -0.3
SLX4-201ENST00000294008 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 ASNSD1Q9NWL6 643 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 COQ6Q9Y2Z9 468 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
SLX4-201ENST00000294008 SCNN1BP51168 640 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 GSTA3Q16772 222 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 SLC25A41Q8N5S1 370 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 PPP2R2CQ9Y2T4 447 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 ITIH6Q6UXX5 1313 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 MAPK13O15264 365 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 ZNF157P51786 506 aaPredicted RBP13.15□□□□□ -0.3
SLX4-201ENST00000294008 NBPF9Q3BBW0 867 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 TBCKQ8TEA7 893 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 TUBGCP3Q96CW5 907 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 IQCMA0A1B0GVH7 501 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 MAPK6Q16659 721 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 SNX30Q5VWJ9 437 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 TMEM270Q6UE05 265 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 OR6J1Q8NGC5 347 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 PIN4Q9Y237 131 aaKnown RBP13.15□□□□□ -0.3
SLX4-201ENST00000294008 PLIN5Q00G26 463 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 AP3B2Q13367 1082 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 C11orf88Q6PI97 169 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 CLYBLQ8N0X4 340 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 JRKLQ9Y4A0 524 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 ADD1P35611 737 aaKnown RBP13.15□□□□□ -0.3
SLX4-201ENST00000294008 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 SAAL1Q96ER3 474 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 COPS7BQ9H9Q2 264 aaPredicted RBP13.15□□□□□ -0.3
SLX4-201ENST00000294008 IL1RL2Q9HB29 575 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 SLC39A10Q9ULF5 831 aa13.15□□□□□ -0.3
SLX4-201ENST00000294008 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.31
SLX4-201ENST00000294008 ALS2CLQ60I27 953 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 ZBED8Q8IZ13 594 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 MYLK2Q9H1R3 596 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 ATP6V1HQ9UI12 483 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 ANAPC7Q9UJX3 599 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.31
SLX4-201ENST00000294008 ABCB11O95342 1321 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 LRG1P02750 347 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 S100A5P33763 92 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 DR1Q01658 176 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 CAPRIN2Q6IMN6 1127 aaKnown RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 CCDC3Q9BQI4 270 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 OSGEPL1Q9H4B0 414 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 VTI1BQ9UEU0 232 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLX4-201ENST00000294008 SULT1E1P49888 294 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 SRPRBQ9Y5M8 271 aaKnown RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 CCDC81Q6ZN84 652 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 IFNEQ86WN2 208 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 SYTL1Q8IYJ3 562 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 DDX39BQ13838 428 aaKnown RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 PTRHD1Q6GMV3 140 aaKnown RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 TIGD7Q6NT04 549 aaPredicted RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 PABPC5Q96DU9 382 aaKnown RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 SH3GL2Q99962 352 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 IGFLR1Q9H665 355 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 PCDHB7Q9Y5E2 793 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 KRT37O76014 449 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 COPB1P53618 953 aaKnown RBP13.14□□□□□ -0.31
SLX4-201ENST00000294008 NCKAP1LP55160 1127 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 CUL3Q13618 768 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 NUGGCQ68CJ6 796 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 KLHL31Q9H511 634 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 SYBUQ9NX95 663 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 SNX6Q9UNH7 406 aa13.14□□□□□ -0.31
SLX4-201ENST00000294008 RNF103O00237 685 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 OR1G1P47890 313 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 SNRNP48Q6IEG0 339 aaKnown RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 CCDC149Q6ZUS6 474 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 TMA16Q96EY4 203 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms