RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PIEZO1Q92508 2521 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 KMT2EQ8IZD2 1858 aa28.02■■■□□ 2.08
U2AF1-201ENST00000291552 OR52Z1P0C646 297 aa28.02■■■□□ 2.08
U2AF1-201ENST00000291552 KANK3Q6NY19 840 aa28.02■■■□□ 2.08
U2AF1-201ENST00000291552 C12orf76Q8N812 135 aaPredicted RBP28.02■■■□□ 2.08
U2AF1-201ENST00000291552 CNNM3Q8NE01 707 aa28.02■■■□□ 2.08
U2AF1-201ENST00000291552 GAD1Q99259 594 aa28.02■■■□□ 2.08
U2AF1-201ENST00000291552 POLR3CQ9BUI4 534 aaPredicted RBP28.02■■■□□ 2.08
U2AF1-201ENST00000291552 NXF3Q9H4D5 531 aaKnown RBP28.02■■■□□ 2.08
U2AF1-201ENST00000291552 MIOSQ9NXC5 875 aa28.02■■■□□ 2.08
U2AF1-201ENST00000291552 ARL5CA6NH57 179 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 NRP1O14786 923 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 SP100P23497 879 aaPredicted RBP28.01■■■□□ 2.07
U2AF1-201ENST00000291552 MLH1P40692 756 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 TPRNQ4KMQ1 711 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 CDR2LQ86X02 465 aaPredicted RBP28.01■■■□□ 2.07
U2AF1-201ENST00000291552 COLGALT2Q8IYK4 626 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 ZFP42Q96MM3 310 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 ADAM7Q9H2U9 754 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 POMKQ9H5K3 350 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 KANSL3Q9P2N6 904 aa28.01■■■□□ 2.07
U2AF1-201ENST00000291552 DBR1Q9UK59 544 aaKnown RBP28.01■■■□□ 2.07
U2AF1-201ENST00000291552 WEE2P0C1S8 567 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 ZXDAP98168 799 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 DSC1Q08554 894 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 ORC2Q13416 577 aaPredicted RBP28■■■□□ 2.07
U2AF1-201ENST00000291552 NBR1Q14596 966 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 TTC38Q5R3I4 469 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 MAEAQ7L5Y9 396 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 BSNDQ8WZ55 320 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 ZSCAN31Q96LW9 406 aaPredicted RBP28■■■□□ 2.07
U2AF1-201ENST00000291552 UBN1Q9NPG3 1134 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 FAN1Q9Y2M0 1017 aa28■■■□□ 2.07
U2AF1-201ENST00000291552 F8W810 466 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 LILRB3O75022 631 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 SSBP05455 408 aaKnown RBP eCLIP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 SCNN1GP51170 649 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 HMGN5P82970 282 aaKnown RBP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 ITIH3Q06033 890 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 BMS1Q14692 1282 aaKnown RBP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 RARS2Q5T160 578 aaKnown RBP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 CDCA2Q69YH5 1023 aaPredicted RBP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 TRIM67Q6ZTA4 783 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 NOSTRINQ8IVI9 506 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 C4orf32Q8N8J7 132 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 FAM193BQ96PV7 902 aaPredicted RBP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 APOL6Q9BWW8 343 aa27.99■■■□□ 2.07
U2AF1-201ENST00000291552 SH2B1Q9NRF2 756 aaPredicted RBP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 PRG3Q9Y2Y8 225 aaPredicted RBP27.99■■■□□ 2.07
U2AF1-201ENST00000291552 EFEMP2O95967 443 aa27.98■■■□□ 2.07
U2AF1-201ENST00000291552 GIT2Q14161 759 aa27.98■■■□□ 2.07
U2AF1-201ENST00000291552 GSTCDQ8NEC7 633 aa27.98■■■□□ 2.07
U2AF1-201ENST00000291552 DZANK1Q9NVP4 752 aa27.98■■■□□ 2.07
U2AF1-201ENST00000291552 TRIP11Q15643 1979 aa27.98■■■□□ 2.07
U2AF1-201ENST00000291552 TMEM221A6NGB7 291 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 LRRIQ4A6NIV6 560 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 TTLL13PA6NNM8 815 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 M0R296 226 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 NPTXRO95502 500 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 ALDH2P05091 517 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 RPA1P27694 616 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 ECM1Q16610 540 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 PPP4R3CPQ6ZMV5 832 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 TAS1R1Q7RTX1 841 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 RNF168Q8IYW5 571 aaPredicted RBP27.97■■■□□ 2.07
U2AF1-201ENST00000291552 MCPH1Q8NEM0 835 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 KLHL5Q96PQ7 755 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 NACC1Q96RE7 527 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 HERC2P3Q9BVR0 1158 aa27.97■■■□□ 2.07
U2AF1-201ENST00000291552 MTCL1Q9Y4B5 1905 aaKnown RBP27.96■■■□□ 2.07
U2AF1-201ENST00000291552 A0A1B0GUA9 196 aa27.96■■■□□ 2.07
U2AF1-201ENST00000291552 SOD2P04179 222 aa27.96■■■□□ 2.07
U2AF1-201ENST00000291552 CNPP09543 421 aaKnown RBP27.96■■■□□ 2.07
U2AF1-201ENST00000291552 AKAP5P24588 427 aa27.96■■■□□ 2.07
U2AF1-201ENST00000291552 RBM25P49756 843 aaKnown RBP27.96■■■□□ 2.07
U2AF1-201ENST00000291552 PTPN21Q16825 1174 aa27.96■■■□□ 2.07
U2AF1-201ENST00000291552 CES5AQ6NT32 575 aa27.96■■■□□ 2.07
U2AF1-201ENST00000291552 SLC27A1Q6PCB7 646 aa27.96■■■□□ 2.07
U2AF1-201ENST00000291552 GIT1Q9Y2X7 761 aa27.96■■■□□ 2.07
U2AF1-201ENST00000291552 C2CD4DB7Z1M9 353 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 EDN1P05305 212 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 HOXD11P31277 338 aaPredicted RBP27.95■■■□□ 2.06
U2AF1-201ENST00000291552 OR1G1P47890 313 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 NCBP1Q09161 790 aaKnown RBP27.95■■■□□ 2.06
U2AF1-201ENST00000291552 KIAA1841Q6NSI8 718 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 PADI6Q6TGC4 694 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 BMP8AQ7Z5Y6 402 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 NECTIN4Q96NY8 510 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 TRIM6Q9C030 488 aaPredicted RBP27.95■■■□□ 2.06
U2AF1-201ENST00000291552 FZD8Q9H461 694 aa27.95■■■□□ 2.06
U2AF1-201ENST00000291552 U2AF2P26368 475 aaKnown RBP eCLIP27.94■■■□□ 2.06
U2AF1-201ENST00000291552 MTHFRP42898 656 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 TRAPPC10P48553 1259 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 TOB1P50616 345 aaPredicted RBP27.94■■■□□ 2.06
U2AF1-201ENST00000291552 FXR2P51116 673 aaKnown RBP eCLIP27.94■■■□□ 2.06
U2AF1-201ENST00000291552 CLCN4P51793 760 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 FAM184AQ8NB25 1140 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 TMEM87AQ8NBN3 555 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 ERMNQ8TAM6 284 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 ASIC4Q96FT7 647 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms