RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 KIRREL3Q8IZU9 778 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 MTMR14Q8NCE2 650 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 TUBB6Q9BUF5 446 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 METTL14Q9HCE5 456 aaKnown RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 FZD9O00144 591 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 HOXC6P09630 235 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 ZBTB48P10074 688 aaPredicted RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 CYP2J2P51589 502 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 ADAM9Q13443 819 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 SLFN12LQ6IEE8 588 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 SWSAP1Q6NVH7 229 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 SPATA4Q8NEY3 305 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 WDR91A4D1P6 747 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 H3BQF6 201 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 STXBP3O00186 592 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 RPLP2P05387 115 aaKnown RBP12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 STAT5BP51692 787 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 ATP2A3Q93084 1043 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 SGSM3Q96HU1 749 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 MTRQ99707 1265 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 PARVGQ9HBI0 331 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 ADAMTS1Q9UHI8 967 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 SRPRBQ9Y5M8 271 aaKnown RBP12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 BZW2Q9Y6E2 419 aaKnown RBP12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 GYG2O15488 501 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 ACSL3O95573 720 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 SRGAP2CP0DJJ0 459 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 CA4P22748 312 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 CASP1P29466 404 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 DR1Q01658 176 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 FSTL1Q12841 308 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 CTTNQ14247 550 aaKnown RBP12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 RESP18Q5W5W9 173 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 AGBL1Q96MI9 1066 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 GGT7Q9UJ14 662 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 TTC36A6NLP5 189 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 SHMT1P34896 483 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 FAM133AQ8N9E0 248 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 BBOF1Q8ND07 529 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 IGDCC4Q8TDY8 1250 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 SNX24Q9Y343 169 aa12.15□□□□□ -0.46
NPC1L1-201ENST00000289547 CCDC188H7C350 402 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 NCK2O43639 380 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 DCTN3O75935 186 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 ATP5HO75947 161 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 CASC4Q6P4E1 433 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 TAB3Q8N5C8 712 aaPredicted RBP12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 NSMCE1Q8WV22 266 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 JMJD4Q9H9V9 463 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 TOPORSQ9NS56 1045 aaPredicted RBP12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 FAM198AQ9UFP1 575 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 ZNF148Q9UQR1 794 aa12.15□□□□□ -0.47
NPC1L1-201ENST00000289547 KLRG2A4D1S0 409 aaPredicted RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 K7ERI5 159 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 RNF34Q969K3 372 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 ANLNQ9NQW6 1124 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 AP5Z1O43299 807 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 PALMO75781 387 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 KRT14P02533 472 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 CCNE1P24864 410 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 KLC1Q07866 573 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 SNX1Q13596 522 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 DDX4Q9NQI0 724 aaKnown RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 DNAJC17Q9NVM6 304 aaKnown RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 RIC1Q4ADV7 1423 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 MAGEB2O15479 319 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 MSCO60682 206 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 PLA2G4BP0C869 781 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 CD19P15391 556 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 MAN1A1P33908 653 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 IER5Q5VY09 327 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 ADGRA1Q86SQ6 560 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 TRIML2Q8N7C3 387 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 GPRASP2Q96D09 838 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 THAP9Q9H5L6 903 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 TCRBV5S4A2TA0A5A2 114 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 TTC26A0AVF1 554 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 RRN3P2A6NIE6 340 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 MEIS1O00470 390 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 CDC27P30260 824 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 EPHA7Q15375 998 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 MAPK6Q16659 721 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 CYB5D1Q6P9G0 228 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms