RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 DBR1Q9UK59 544 aaKnown RBP10.59□□□□□ -0.71
HMHB1-201ENST00000289448 USP20Q9Y2K6 914 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 RBM19Q9Y4C8 960 aaKnown RBP10.59□□□□□ -0.71
HMHB1-201ENST00000289448 IRAK3Q9Y616 596 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 CACNA1HO95180 2353 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 CNTNAP2Q9UHC6 1331 aa10.58□□□□□ -0.71
HMHB1-201ENST00000289448 ZNF318Q5VUA4 2279 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 A0A1B0GUA9 196 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.58□□□□□ -0.72
HMHB1-201ENST00000289448 FSD2A1L4K1 749 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 NRP1O14786 923 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 LILRB3O75022 631 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 CD2BP2O95400 341 aaKnown RBP10.58□□□□□ -0.72
HMHB1-201ENST00000289448 WEE2P0C1S8 567 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 EPCAMP16422 314 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 AKAP5P24588 427 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 CA8P35219 290 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 MLH1P40692 756 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 ORC2Q13416 577 aaPredicted RBP10.58□□□□□ -0.72
HMHB1-201ENST00000289448 PCBP1Q15365 356 aaKnown RBP eCLIP10.58□□□□□ -0.72
HMHB1-201ENST00000289448 PTPN14Q15678 1187 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 IL17AQ16552 155 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 NOTUMQ6P988 496 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 TAS1R1Q7RTX1 841 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 COLGALT2Q8IYK4 626 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 C12orf76Q8N812 135 aaPredicted RBP10.58□□□□□ -0.72
HMHB1-201ENST00000289448 GSTCDQ8NEC7 633 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 URGCPQ8TCY9 931 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 SLC22A17Q8WUG5 538 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 CASP10Q92851 521 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 CCDC51Q96ER9 411 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
HMHB1-201ENST00000289448 APOL6Q9BWW8 343 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 FZD8Q9H461 694 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 MARCH5Q9NX47 278 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 PCDHB6Q9Y5E3 794 aa10.58□□□□□ -0.72
HMHB1-201ENST00000289448 LRRIQ4A6NIV6 560 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 NPTXRO95502 500 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 EFEMP2O95967 443 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 ALDH2P05091 517 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 EDN1P05305 212 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 SSBP05455 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
HMHB1-201ENST00000289448 SRGAP2BP0DMP2 458 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 HOXB8P17481 243 aaPredicted RBP10.57□□□□□ -0.72
HMHB1-201ENST00000289448 CYP11B2P19099 503 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 SP100P23497 879 aaPredicted RBP10.57□□□□□ -0.72
HMHB1-201ENST00000289448 TRAPPC10P48553 1259 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
HMHB1-201ENST00000289448 SCNN1GP51170 649 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 DSC1Q08554 894 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 PTGDRQ13258 359 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 RABEP1Q15276 862 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 CDCA2Q69YH5 1023 aaPredicted RBP10.57□□□□□ -0.72
HMHB1-201ENST00000289448 PPP4R3CPQ6ZMV5 832 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 CNNM3Q8NE01 707 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 MCPH1Q8NEM0 835 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 EDAQ92838 391 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 FAM193BQ96PV7 902 aaPredicted RBP10.57□□□□□ -0.72
HMHB1-201ENST00000289448 TMEM175Q9BSA9 504 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 CXCL16Q9H2A7 254 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 ADAM7Q9H2U9 754 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 UBN1Q9NPG3 1134 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 FAN1Q9Y2M0 1017 aa10.57□□□□□ -0.72
HMHB1-201ENST00000289448 PRG3Q9Y2Y8 225 aaPredicted RBP10.57□□□□□ -0.72
HMHB1-201ENST00000289448 ARHGEF35A5YM69 484 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 PP2D1A8MPX8 630 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 CNPP09543 421 aaKnown RBP10.56□□□□□ -0.72
HMHB1-201ENST00000289448 CDC25AP30304 524 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 PLA2G5P39877 138 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 CCT6AP40227 531 aaKnown RBP10.56□□□□□ -0.72
HMHB1-201ENST00000289448 OR1G1P47890 313 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
HMHB1-201ENST00000289448 GNL2Q13823 731 aaKnown RBP10.56□□□□□ -0.72
HMHB1-201ENST00000289448 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 RARS2Q5T160 578 aaKnown RBP10.56□□□□□ -0.72
HMHB1-201ENST00000289448 SLC27A1Q6PCB7 646 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 RNF168Q8IYW5 571 aaPredicted RBP10.56□□□□□ -0.72
HMHB1-201ENST00000289448 IGSF22Q8N9C0 903 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 ERMNQ8TAM6 284 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 RABGGTAQ92696 567 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 TMX3Q96JJ7 454 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 KLHL5Q96PQ7 755 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 KIFC3Q9BVG8 833 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 BACH2Q9BYV9 841 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 POMKQ9H5K3 350 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 PDZD7Q9H5P4 517 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 KLK14Q9P0G3 267 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 CACNG4Q9UBN1 327 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
HMHB1-201ENST00000289448 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 GIT1Q9Y2X7 761 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 WDR87Q6ZQQ6 2873 aa10.56□□□□□ -0.72
HMHB1-201ENST00000289448 SOD2P04179 222 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms