RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 FAM105AQ9NUU6 356 aa21.15■□□□□ 0.98
KRTCAP3-201ENST00000288873 LRFN2Q9ULH4 789 aa21.15■□□□□ 0.98
KRTCAP3-201ENST00000288873 TTC3P53804 2025 aa21.15■□□□□ 0.98
KRTCAP3-201ENST00000288873 A0A0U1RQF3 1178 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 GRXCR1A8MXD5 290 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 MCM4P33991 863 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 RAB27AP51159 221 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 ALCAMQ13740 583 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 EEF1DP3Q658K8 133 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 STXBP4Q6ZWJ1 553 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 ECHDC2Q86YB7 292 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 NPAS4Q8IUM7 802 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 MAP4K3Q8IVH8 894 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 HERC6Q8IVU3 1022 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 GLIS3Q8NEA6 775 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 ERCC4Q92889 916 aaPredicted RBP21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZBED2Q9BTP6 218 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 EIF2AQ9BY44 585 aaKnown RBP21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 SLC39A2Q9NP94 309 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 RNF216Q9NWF9 866 aaPredicted RBP21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 TNFSF13BQ9Y275 285 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 PCDHB7Q9Y5E2 793 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 PCDHB2Q9Y5E7 798 aa21.14■□□□□ 0.97
KRTCAP3-201ENST00000288873 LAMA3Q16787 3333 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 SOX1O00570 391 aaPredicted RBP21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 PRPF6O94906 941 aaKnown RBP21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 SMC2O95347 1197 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 NPTXRO95502 500 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 STAG3L1P0CL83 205 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 SKIP12755 728 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 PSMD2Q13200 908 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 L1TD1Q5T7N2 865 aaKnown RBP21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZPBP2Q6X784 338 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 RNF169Q8NCN4 708 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 SMARCE1Q969G3 411 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 ACCSQ96QU6 501 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 ADPGKQ9BRR6 497 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 TRIM6Q9C030 488 aaPredicted RBP21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 TMEM161AQ9NX61 479 aa21.13■□□□□ 0.97
KRTCAP3-201ENST00000288873 HNRNPDLO14979 420 aaKnown RBP21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZNF623O75123 536 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 GJB5O95377 273 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 LIG4P49917 911 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 KCNA1Q09470 495 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 STK4Q13043 487 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 KCNB1Q14721 858 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 CAMK4Q16566 473 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 EPM2AIP1Q7L775 607 aaPredicted RBP21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZBTB33Q86T24 672 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 CRIPAKQ8N1N5 446 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 GPT2Q8TD30 523 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 TCHPQ9BT92 498 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 ELAC1Q9H777 363 aaKnown RBP21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 PCDHA5Q9Y5H7 936 aa21.12■□□□□ 0.97
KRTCAP3-201ENST00000288873 RHOBTB3O94955 611 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 EOMESO95936 686 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 PIGRP01833 764 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 ATF7P17544 494 aaPredicted RBP21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 RABGGTBP53611 331 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZNF568Q3ZCX4 644 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 APBB1IPQ7Z5R6 666 aaPredicted RBP21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 MRPL10Q7Z7H8 261 aaKnown RBP21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZNF598Q86UK7 904 aaKnown RBP21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 SYCP3Q8IZU3 236 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 SMG8Q8ND04 991 aaKnown RBP21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZBTB45Q96K62 511 aaPredicted RBP21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 IKZF4Q9H2S9 585 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 PTPRHQ9HD43 1115 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 ANKFY1Q9P2R3 1169 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 EXOC7Q9UPT5 735 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 IPPQ9Y573 584 aa21.11■□□□□ 0.97
KRTCAP3-201ENST00000288873 GBF1Q92538 1859 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 ANKRD63C9JTQ0 380 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 EIF3DO15371 548 aaKnown RBP eCLIP21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 TLL1O43897 1013 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 TOM1L1O75674 476 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 PROZP22891 400 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 MATR3P43243 847 aaKnown RBP eCLIP21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 DCAF4L1Q3SXM0 396 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 LRIT3Q3SXY7 679 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 MPZL3Q6UWV2 235 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 KIAA0895Q8NCT3 520 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 SPATA20Q8TB22 786 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 ZNF507Q8TCN5 953 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 LPPQ93052 612 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 PGBD4Q96DM1 585 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 LRCH3Q96II8 777 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 GSDMAQ96QA5 445 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 CDT1Q9H211 546 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 CLSTN2Q9H4D0 955 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 NXF3Q9H4D5 531 aaKnown RBP21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 TMEM206Q9H813 350 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 RMND1Q9NWS8 449 aa21.1■□□□□ 0.97
KRTCAP3-201ENST00000288873 CLDN3O15551 220 aa21.09■□□□□ 0.97
KRTCAP3-201ENST00000288873 DGKIO75912 1065 aa21.09■□□□□ 0.97
KRTCAP3-201ENST00000288873 MBD3O95983 291 aa21.09■□□□□ 0.97
KRTCAP3-201ENST00000288873 MCF2P10911 925 aa21.09■□□□□ 0.97
KRTCAP3-201ENST00000288873 FGFR1P11362 822 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms