RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 COL4A1P02462 1669 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 ROBO1Q9Y6N7 1651 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 MTMR2Q13614 643 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 SYCP2LQ5T4T6 812 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 LIN9Q5TKA1 542 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 PRPF38AQ8NAV1 312 aaKnown RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 ASTE1Q2TB18 679 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 Q4G0T1 1027 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 NUGGCQ68CJ6 796 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 TBC1D1Q86TI0 1168 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 ANKRD35Q8N283 1001 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 ACSF2Q96CM8 615 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 MXRA8Q9BRK3 442 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 STMN4Q9H169 189 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 SLITRK6Q9H5Y7 841 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 GDF3Q9NR23 364 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 SUCLA2Q9P2R7 463 aaPredicted RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 NXF1Q9UBU9 619 aaKnown RBP17.06■□□□□ 0.32
SMAD6-201ENST00000288840 ITGB4P16144 1822 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 FAM160B2Q86V87 743 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 SPIRE2Q8WWL2 714 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 CAVIN3Q969G5 261 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 C9orf72Q96LT7 481 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 IWS1Q96ST2 819 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 ERP44Q9BS26 406 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 SEMA4AQ9H3S1 761 aa17.06■□□□□ 0.32
SMAD6-201ENST00000288840 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 SRGAP2CP0DJJ0 459 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 TRPC3Q13507 836 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 C1orf186Q6ZWK4 172 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 TAOK1Q7L7X3 1001 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 SRRM1Q8IYB3 904 aaKnown RBP17.05■□□□□ 0.32
SMAD6-201ENST00000288840 EPS8L3Q8TE67 593 aaKnown RBP17.05■□□□□ 0.32
SMAD6-201ENST00000288840 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 MYH15Q9Y2K3 1946 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 CHN1P15882 459 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 ZNF662Q6ZS27 426 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 CPNE8Q86YQ8 564 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 CCDC197Q8NCU1 140 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 CYFIP2Q96F07 1278 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
SMAD6-201ENST00000288840 ANAPC5Q9UJX4 755 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 WDR91A4D1P6 747 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 RRP1BQ14684 758 aaKnown RBP17.05■□□□□ 0.32
SMAD6-201ENST00000288840 KRT39Q6A163 491 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 LLGL2Q6P1M3 1020 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 TAS1R2Q8TE23 839 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 PRMT1Q99873 361 aaKnown RBP17.05■□□□□ 0.32
SMAD6-201ENST00000288840 RNF146Q9NTX7 359 aa17.05■□□□□ 0.32
SMAD6-201ENST00000288840 DOT1LQ8TEK3 1739 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 CNGA1P29973 690 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 ZNF844Q08AG5 666 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 TMED2Q15363 201 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
SMAD6-201ENST00000288840 CDR2LQ86X02 465 aaPredicted RBP17.04■□□□□ 0.32
SMAD6-201ENST00000288840 GMCL1Q96IK5 515 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 SCP2P22307 547 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 ALG3Q92685 438 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 TATDN2Q93075 761 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 IGKV6D-41A0A0C4DH26 115 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 SHBGP04278 402 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 IGBP1P78318 339 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 TFAMQ00059 246 aaKnown RBP17.04■□□□□ 0.32
SMAD6-201ENST00000288840 KYNUQ16719 465 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 SPOPLQ6IQ16 392 aa17.04■□□□□ 0.32
SMAD6-201ENST00000288840 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.04■□□□□ 0.32
SMAD6-201ENST00000288840 HOXD13P35453 343 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 ICE2Q659A1 982 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 FBXL13Q8NEE6 735 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 HSD17B14Q9BPX1 270 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 TMEM117Q9H0C3 514 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 ERVK-5Q9HDB9 667 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 HOMER3Q9NSC5 361 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 WRAP73Q9P2S5 460 aaPredicted RBP17.03■□□□□ 0.32
SMAD6-201ENST00000288840 FEM1BQ9UK73 627 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 CHD4Q14839 1912 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 WDR64B1ANS9 1081 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 KRT17Q04695 432 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 IQCKQ8N0W5 287 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 ACTRT1Q8TDG2 376 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 TMBIM4Q9HC24 238 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 OLFML3Q9NRN5 406 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 ADAM22Q9P0K1 906 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 PARP2Q9UGN5 583 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 VAV3Q9UKW4 847 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 PCDHA2Q9Y5H9 948 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 K7ERI5 159 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms