RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 OSTNP61366 133 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 SKIV2LQ15477 1246 aaKnown RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 AMHR2Q16671 573 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 CSPP1Q1MSJ5 1256 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 NAALADL2Q58DX5 795 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 HERC4Q5GLZ8 1057 aaPredicted RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 CLLU1OSQ5K130 101 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 UBXN11Q5T124 520 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 ADALQ6DHV7 355 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 HAUS6Q7Z4H7 955 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 IFNLR1Q8IU57 520 aaPredicted RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 CCDC65Q8IXS2 484 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 TMEM192Q8IY95 271 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 THNSL1Q8IYQ7 743 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 CNNM3Q8NE01 707 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 SP7Q8TDD2 431 aaPredicted RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 NOC3LQ8WTT2 800 aaKnown RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 SPIRE2Q8WWL2 714 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 GUCD1Q96NT3 240 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 SAMD11Q96NU1 681 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 FAM193BQ96PV7 902 aaPredicted RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 RPS6KC1Q96S38 1066 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 TARS2Q9BW92 718 aaKnown RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 MRPL9Q9BYD2 267 aaKnown RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 TMEM117Q9H0C3 514 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 CCDC113Q9H0I3 377 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 BLZF1Q9H2G9 400 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 TNMDQ9H2S6 317 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 FZD8Q9H461 694 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 PDZD7Q9H5P4 517 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 MRPL44Q9H9J2 332 aaKnown RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 RSAD1Q9HA92 442 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 AAASQ9NRG9 546 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 PANK4Q9NVE7 773 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 MTMR10Q9NXD2 777 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 KLK14Q9P0G3 267 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 HCSTQ9UBK5 93 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 SERTAD1Q9UHV2 236 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 GDAQ9Y2T3 454 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 RWDD3Q9Y3V2 267 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 WDR81Q562E7 1941 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 A0A1B0GUA9 196 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 EPOPA6NHQ4 379 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 TTLL13PA6NNM8 815 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 MEIS3P2A8K0S8 358 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 POMCP01189 267 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 EDN1P05305 212 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 MAPTP10636 758 aaKnown RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 ATF7P17544 494 aaPredicted RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 LAG3P18627 525 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 CMA1P23946 247 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 CASP1P29466 404 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 PBX3P40426 434 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 NDUFA8P51970 172 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 YARSP54577 528 aaKnown RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 NCKAP1LP55160 1127 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 ERVK-21P61565 698 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 GPM6BQ13491 265 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 CCDC85BQ15834 202 aaPredicted RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 E2F4Q16254 413 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 FAM187BQ17R55 369 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 DCAF4L1Q3SXM0 396 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 EPC2Q52LR7 807 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 ZC2HC1CQ53FD0 456 aaPredicted RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 NOMO2Q5JPE7 1267 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 NT5DC1Q5TFE4 455 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 EEF1DP3Q658K8 133 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 MPZL3Q6UWV2 235 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 STXBP4Q6ZWJ1 553 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 GRAMD1CQ8IYS0 662 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 SYCP3Q8IZU3 236 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 TMEM161BQ8NDZ6 487 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 ZNF689Q96CS4 500 aaPredicted RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 CCDC34Q96HJ3 373 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 CASD1Q96PB1 797 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 GAD1Q99259 594 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 CCDC94Q9BW85 323 aaPredicted RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 TMEM134Q9H6X4 195 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 MAGEF1Q9HAY2 307 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 UBN1Q9NPG3 1134 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 TYW1Q9NV66 732 aaKnown RBP7.17□□□□□ -1.26
CD44-204ENST00000279452 SNTG2Q9NY99 539 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 ARHGAP28Q9P2N2 729 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 PCDHB12Q9Y5F1 795 aa7.17□□□□□ -1.26
CD44-204ENST00000279452 CLDN3O15551 220 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 ZNF623O75123 536 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 NR1I2O75469 434 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 RECQL4O94761 1208 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 ABCD1P33897 745 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 BMPR1AP36894 532 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 ALDH7A1P49419 539 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 SCNN1GP51170 649 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 ZNF131P52739 623 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 FAM189BP81408 668 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 COASYQ13057 564 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 NOLC1Q14978 699 aaKnown RBP eCLIP7.16□□□□□ -1.26
CD44-204ENST00000279452 PTPROQ16827 1216 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 L1TD1Q5T7N2 865 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms