RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 H7C0C1 242 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 MYO1CO00159 1063 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 FOXN3O00409 490 aaPredicted RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 VIL1P09327 827 aaKnown RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 ATP5OP48047 213 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 CUL1Q13616 776 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 GRK7Q8WTQ7 553 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 MTMR9Q96QG7 549 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 MED15Q96RN5 788 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 ZWILCHQ9H900 591 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 USP20Q9Y2K6 914 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 SETD1AO15047 1707 aaKnown RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 H3BQF6 201 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 ZRANB2O95218 330 aaKnown RBP eCLIP15.36■□□□□ 0.05
TMEM47-201ENST00000275954 ALDH3A1P30838 453 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 SOX10P56693 466 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 SLC8A3P57103 927 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 CDO1Q16878 200 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 CDR2LQ86X02 465 aaPredicted RBP15.36■□□□□ 0.05
TMEM47-201ENST00000275954 FAM149B1Q96BN6 582 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 CDCA5Q96FF9 252 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 RCCD1A6NED2 376 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 YBX3P16989 372 aaKnown RBP eCLIP15.36■□□□□ 0.05
TMEM47-201ENST00000275954 NPY5RQ15761 445 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 SNRNP35Q16560 246 aaKnown RBP15.36■□□□□ 0.05
TMEM47-201ENST00000275954 SEZ6Q53EL9 994 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 RSRC2Q7L4I2 434 aaKnown RBP15.36■□□□□ 0.05
TMEM47-201ENST00000275954 SPATA20Q8TB22 786 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 KLHL11Q9NVR0 708 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 VGLL4Q14135 290 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 CROCCP2Q86T23 111 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 TRIM59Q8IWR1 403 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 C4orf32Q8N8J7 132 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 GDAP1Q8TB36 358 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 CPA5Q8WXQ8 436 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 HPCAL4Q9UM19 191 aa15.36■□□□□ 0.05
TMEM47-201ENST00000275954 ZBTB22O15209 634 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 CLTAP09496 248 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 FGRP09769 529 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 VCAM1P19320 739 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 ZNF131P52739 623 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 MRPL47Q9HD33 250 aaKnown RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 JPH1Q9HDC5 661 aaPredicted RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 CYP2C19P33261 490 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 WDR59Q6PJI9 974 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 ZNF571Q7Z3V5 609 aaPredicted RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 RHPN2Q8IUC4 686 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 POP1Q99575 1024 aaKnown RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 ZNF302Q9NR11 478 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 HESX1Q9UBX0 185 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 SLC9A2Q9UBY0 812 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 AGO2Q9UKV8 859 aaKnown RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 TARSL2A2RTX5 802 aaKnown RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 P4HA1P13674 534 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 SFNP31947 248 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 IFRD2Q12894 506 aaPredicted RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 MTM1Q13496 603 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 CBWD2Q8IUF1 395 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 IKZF4Q9H2S9 585 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 OSGEPQ9NPF4 335 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 RBAKQ9NYW8 714 aaPredicted RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.35■□□□□ 0.05
TMEM47-201ENST00000275954 ODF2LQ9ULJ1 636 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 GAKO14976 1311 aa15.35■□□□□ 0.05
TMEM47-201ENST00000275954 PI4K2BG5E9Z4 385 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 GOLGA8MH3BSY2 632 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 WDR46O15213 610 aaKnown RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 CCDC137Q6PK04 289 aaKnown RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 RFX6Q8HWS3 928 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 ANKRD36BP1Q96IX9 119 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 RUNDC3BQ96NL0 473 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 TACO1Q9BSH4 297 aaKnown RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 PCSK1NQ9UHG2 260 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 MAD1L1Q9Y6D9 718 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 DYNC1LI2O43237 492 aaPredicted RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 YWHAEP62258 255 aaKnown RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 BASP1P80723 227 aaKnown RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 TMED2Q15363 201 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 MAPK6Q16659 721 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 TMEM139Q8IV31 216 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 TRIM7Q9C029 511 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 EFCC1Q9HA90 598 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 PNMA3Q9UL41 463 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 MIF4GDA9UHW6 222 aaKnown RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 YWHAGP61981 247 aaKnown RBP eCLIP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 SNAPC2Q13487 334 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 ECM1Q16610 540 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 ERICH1Q86X53 443 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 NLRP7Q8WX94 980 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 POLR3CQ9BUI4 534 aaPredicted RBP15.34■□□□□ 0.05
TMEM47-201ENST00000275954 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 THAP2Q9H0W7 228 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 TMX2Q9Y320 296 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 ALG6Q9Y672 507 aa15.34■□□□□ 0.05
TMEM47-201ENST00000275954 WDR91A4D1P6 747 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms