RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PRAMEP78395 509 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 EHHADHQ08426 723 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 CLEC4GQ6UXB4 293 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 AFG1LQ8WV93 481 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 PPP1R13BQ96KQ4 1090 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 MLH3Q9UHC1 1453 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 STX7O15400 261 aaKnown RBP14.02□□□□□ -0.17
PRDM16-201ENST00000270722 CLASP2O75122 1294 aaKnown RBP14.02□□□□□ -0.17
PRDM16-201ENST00000270722 SCN4BQ8IWT1 228 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 FMO2Q99518 471 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 SH3GLB2Q9NR46 395 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 EVA1BQ9NVM1 165 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 TRAF3IP3Q9Y228 551 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 CARNS1A5YM72 827 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 STAT3P40763 770 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 KRT74Q7RTS7 529 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 CHCHD4Q8N4Q1 142 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 APOBEC2Q9Y235 224 aaKnown RBP14.02□□□□□ -0.17
PRDM16-201ENST00000270722 SNX14Q9Y5W7 946 aa14.02□□□□□ -0.17
PRDM16-201ENST00000270722 IDH3BO43837 385 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 FCER1AP12319 257 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 TCP11X2Q5H9J9 407 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HIBCHQ6NVY1 386 aaPredicted RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 MASTLQ96GX5 879 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 FEM1BQ9UK73 627 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 PSMD3O43242 534 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HLA-DPA1P20036 260 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 ANXA11P50995 505 aaKnown RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 COPS2P61201 443 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 RASSF5Q8WWW0 418 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 EGFL8Q99944 293 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 SLC39A2Q9NP94 309 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 VPS9D1Q9Y2B5 631 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 KIF1BO60333 1816 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 CDC40O60508 579 aaKnown RBP eCLIP14.01□□□□□ -0.178e-9■■□□□ 12.8
PRDM16-201ENST00000270722 PFKFB1P16118 471 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 SERPINB3P29508 390 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 LBRQ14739 615 aaKnown RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 DOK7Q18PE1 504 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 PROM2Q8N271 834 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 UBE4BO95155 1302 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 PIK3R2O00459 728 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 LSM1O15116 133 aaKnown RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 BIRC5O15392 142 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 FAM107AO95990 144 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HIST1H2AGP0C0S8 130 aaPredicted RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HIST1H2ADP20671 130 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 SDC4P31431 198 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HPCAP84074 193 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 BFSP2Q13515 415 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 KLHL38Q2WGJ6 581 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 ZNF699Q32M78 642 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 PPP1R18Q6NYC8 613 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HIST1H2AHQ96KK5 128 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HIST1H2AJQ99878 128 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 H2AFJQ9BTM1 129 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 SERTAD1Q9UHV2 236 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 FAM32AQ9Y421 112 aaKnown RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 NUP85Q9BW27 656 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 PPIDQ08752 370 aaKnown RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 ACCSLQ4AC99 568 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 OTULINQ96BN8 352 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 AP4S1Q9Y587 144 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 ASNA1O43681 348 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 CYP2C19P33261 490 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 EIF2B2P49770 351 aaKnown RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 ZNF235Q14590 738 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 ADRM1Q16186 407 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 ALKBH8Q96BT7 664 aaKnown RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 FAM49AQ9H0Q0 323 aaPredicted RBP14.01□□□□□ -0.17
PRDM16-201ENST00000270722 HDAC6Q9UBN7 1215 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 FAM135BQ49AJ0 1406 aa14.01□□□□□ -0.17
PRDM16-201ENST00000270722 H7C0S8 307 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PPP6R2O75170 966 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 P2RX5Q93086 422 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 CARD9Q9H257 536 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PRDM5Q9NQX1 630 aaPredicted RBP14□□□□□ -0.17
PRDM16-201ENST00000270722 STOML2Q9UJZ1 356 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 BLOC1S6Q9UL45 172 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PLEKHG1Q9ULL1 1385 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 C5orf58C9J3I9 102 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 GUCY2DQ02846 1103 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 STILQ15468 1287 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 NMRK1Q9NWW6 199 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PTPN22Q9Y2R2 807 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PRG3Q9Y2Y8 225 aaPredicted RBP14□□□□□ -0.17
PRDM16-201ENST00000270722 SMAPO00193 183 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 KCNH2Q12809 1159 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 MTERF2Q49AM1 385 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 THOC7Q6I9Y2 204 aaKnown RBP14□□□□□ -0.17
PRDM16-201ENST00000270722 IKBIPQ70UQ0 350 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 UCMAQ8WVF2 138 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 LRRC39Q96DD0 335 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 KLHL25Q9H0H3 589 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 NGRNQ9NPE2 291 aaKnown RBP14□□□□□ -0.17
PRDM16-201ENST00000270722 UVRAGQ9P2Y5 699 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 CYTH3O43739 400 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms