RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 MXD4Q14582 209 aaPredicted RBP16.73■□□□□ 0.27
COPS3-201ENST00000268717 MTF1Q14872 753 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 ZNF484Q5JVG2 852 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 DPY19L2P1Q6NXN4 242 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 ZNF662Q6ZS27 426 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 TAS1R3Q7RTX0 852 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 ASAP3Q8TDY4 903 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 DPF3Q92784 378 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 TMEM143Q96AN5 459 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 KIFC3Q9BVG8 833 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
COPS3-201ENST00000268717 EPN1Q9Y6I3 576 aaPredicted RBP16.73■□□□□ 0.27
COPS3-201ENST00000268717 COL1A2P08123 1366 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 DNM1LO00429 736 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 PPFIA4O75335 1185 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 LGALS2P05162 132 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 RARBP10826 455 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 RFX1P22670 979 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 ADSSP30520 456 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 EFNA5P52803 228 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 STRN3Q13033 797 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 USP37Q86T82 979 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 ARRDC4Q8NCT1 418 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 DEPTORQ8TB45 409 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 CHP1Q99653 195 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 KIAA1586Q9HCI6 787 aa16.72■□□□□ 0.27
COPS3-201ENST00000268717 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 LRRC53A6NM62 1247 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.27
COPS3-201ENST00000268717 HNRNPDLO14979 420 aaKnown RBP16.71■□□□□ 0.27
COPS3-201ENST00000268717 PON1P27169 355 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 ADCYAP1R1P41586 468 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 VAMP7P51809 220 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 ETF1P62495 437 aaKnown RBP16.71■□□□□ 0.27
COPS3-201ENST00000268717 KRT83P78385 493 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 KLHDC7AQ5VTJ3 777 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 CDCA2Q69YH5 1023 aaPredicted RBP16.71■□□□□ 0.27
COPS3-201ENST00000268717 SLC39A4Q6P5W5 647 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 RRAGAQ7L523 313 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 TRIM50Q86XT4 487 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 FMNL3Q8IVF7 1028 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
COPS3-201ENST00000268717 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.27
COPS3-201ENST00000268717 AIPL1Q9NZN9 384 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 GCNT4Q9P109 453 aa16.71■□□□□ 0.27
COPS3-201ENST00000268717 ANKRD63C9JTQ0 380 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 ASAP2O43150 1006 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 UCHL3P15374 230 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 CETN1Q12798 172 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 CAPSQ13938 189 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 GJC2Q5T442 439 aaPredicted RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 KIF18AQ8NI77 898 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 TMC2Q8TDI7 906 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 CRACR2AQ9BSW2 395 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 DESI2Q9BSY9 194 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 C2orf40Q9H1Z8 148 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 NHEJ1Q9H9Q4 299 aaPredicted RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 ZNF215Q9UL58 517 aaPredicted RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 TRPC6Q9Y210 931 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 USP20Q9Y2K6 914 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 LRRIQ4A6NIV6 560 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 TISP43B9A030 160 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 IPO7O95373 1038 aaKnown RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 LCA5LO95447 670 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 SMPD1P17405 629 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 MARK3P27448 753 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 GTF2H1P32780 548 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 POLR2FP61218 127 aaKnown RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 SNRNP35Q16560 246 aaKnown RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 SFMBT2Q5VUG0 894 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 TRIM65Q6PJ69 517 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 VTI1AQ96AJ9 217 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 LENG1Q96BZ8 264 aaPredicted RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 MFSD14AQ96MC6 490 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 SIX2Q9NPC8 291 aa16.7■□□□□ 0.26
COPS3-201ENST00000268717 R3HCC1Q9Y3T6 440 aaKnown RBP16.7■□□□□ 0.26
COPS3-201ENST00000268717 KBTBD13C9JR72 458 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 K7ERI5 159 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 MAGEB2O15479 319 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 EVI5O60447 810 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 SLC9A1P19634 815 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 ANXA13P27216 316 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 LIG4P49917 911 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 MYL7Q01449 175 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 POU5F1BQ06416 359 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 ZPBP2Q6X784 338 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 GPD1LQ8N335 351 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 PRPF31Q8WWY3 499 aaKnown RBP16.69■□□□□ 0.26
COPS3-201ENST00000268717 POMGNT1Q8WZA1 660 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 BICD1Q96G01 975 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 CCDC42Q96M95 316 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 ARHGAP20Q9P2F6 1191 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 MYO1AQ9UBC5 1043 aa16.69■□□□□ 0.26
COPS3-201ENST00000268717 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms