RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TULP2O00295 520 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 PEX5P50542 639 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 CYP24A1Q07973 514 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 HSP90B2PQ58FF3 399 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 SND1Q7KZF4 910 aaKnown RBP eCLIP12.07□□□□□ -0.48
MSH3-201ENST00000265081 DNAAF5Q86Y56 855 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 SYCP3Q8IZU3 236 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 DNERQ8NFT8 737 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 NSUN6Q8TEA1 469 aaKnown RBP12.07□□□□□ -0.48
MSH3-201ENST00000265081 AFAP1L1Q8TED9 768 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 GPRC5CQ9NQ84 441 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 GRIN2DO15399 1336 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 ZNF541Q9H0D2 1346 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 TMEM150BA6NC51 233 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 CYP1B1Q16678 543 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 LBX2Q6XYB7 198 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 PEX26Q7Z412 305 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 ATP8B4Q8TF62 1192 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 SLC20A1Q8WUM9 679 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 PCDHA3Q9Y5H8 950 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 KIAA0391O15091 583 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 SLC16A4O15374 487 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 LRRN2O75325 713 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 DGAT1O75907 488 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 FMO1Q01740 532 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 GCNT1Q02742 428 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 DEFB132Q7Z7B7 95 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 DHX38Q92620 1227 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 TAF4BQ92750 862 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 NIFKQ9BYG3 293 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 EPB41L5Q9HCM4 733 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 CNTN6Q9UQ52 1028 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 ZSCAN5CA6NGD5 496 aaPredicted RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 SRRM3A6NNA2 597 aaPredicted RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 CNGA1P29973 690 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 DRG2P55039 364 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 HNRNPH2P55795 449 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 PPP2R5EQ16537 467 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 PLA2G4FQ68DD2 849 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 KRT39Q6A163 491 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 OTUD6AQ7L8S5 288 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 SAMD7Q7Z3H4 446 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 NOP9Q86U38 636 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 MCPH1Q8NEM0 835 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
MSH3-201ENST00000265081 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 FAM81BQ96LP2 452 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 ZIM3Q96PE6 472 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 SYNGAP1Q96PV0 1343 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 MIF4GDA9UHW6 222 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 ATP4AP20648 1035 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 TNNT3P45378 269 aaPredicted RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 PEX3P56589 373 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 PRPF4BQ13523 1007 aaKnown RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 LRRC31Q6UY01 552 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 ATP6V0A1Q93050 837 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 GOLPH3Q9H4A6 298 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 UBE2TQ9NPD8 197 aaPredicted RBP12.06□□□□□ -0.48
MSH3-201ENST00000265081 ADGRA2Q96PE1 1338 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 MGAMO43451 1857 aa12.06□□□□□ -0.48
MSH3-201ENST00000265081 PSAPP07602 524 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 MXI1P50539 228 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 NAP1L1P55209 391 aaKnown RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 CETN1Q12798 172 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 DMP1Q13316 513 aaPredicted RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 ENOSF1Q7L5Y1 443 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 CPXCR1Q8N123 301 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 C12orf50Q8NA57 414 aaPredicted RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 CTNNBL1Q8WYA6 563 aaPredicted RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 A1CFQ9NQ94 594 aaKnown RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 NFU1Q9UMS0 254 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 PPME1Q9Y570 386 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 OPA1O60313 960 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 ZEB2O60315 1214 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 GGPS1O95749 300 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 PPFIA1Q13136 1202 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 DAAM2Q86T65 1068 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 CBWD2Q8IUF1 395 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 RIN2Q8WYP3 895 aaPredicted RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 TEX13BQ9BXU2 312 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 DHX33Q9H6R0 707 aaKnown RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 ACAD9Q9H845 621 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 CYP26B1Q9NR63 512 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 H0YCG3 227 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 SART1O43290 800 aaKnown RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 SUPT20HL2P0C7V6 817 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 ARL2P36404 184 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 GCLMP48507 274 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 UAP1Q16222 522 aaPredicted RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 SUPT20HL1Q3ZLR7 823 aa12.05□□□□□ -0.48
MSH3-201ENST00000265081 SNRNP48Q6IEG0 339 aaKnown RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 CCDC60Q8IWA6 550 aaPredicted RBP12.05□□□□□ -0.48
MSH3-201ENST00000265081 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms