RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NPTXRO95502 500 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 RPN1P04843 607 aaKnown RBP20.14■□□□□ 0.81
SDF4-201ENST00000263741 EHHADHQ08426 723 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 ATF7IP2Q5U623 682 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 SLC24A5Q71RS6 500 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 BICD1Q96G01 975 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 MRPL4Q9BYD3 311 aaKnown RBP20.14■□□□□ 0.81
SDF4-201ENST00000263741 GRPEL1Q9HAV7 217 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 SLC39A2Q9NP94 309 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 CHST12Q9NRB3 414 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 ANKFY1Q9P2R3 1169 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 CHD7Q9P2D1 2997 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 PRPF6O94906 941 aaKnown RBP20.13■□□□□ 0.81
SDF4-201ENST00000263741 FGFR1P11362 822 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 HARSP12081 509 aaKnown RBP20.13■□□□□ 0.81
SDF4-201ENST00000263741 SARSP49591 514 aaKnown RBP20.13■□□□□ 0.81
SDF4-201ENST00000263741 CAMK4Q16566 473 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 ECHDC2Q86YB7 292 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 GPT2Q8TD30 523 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 ZBTB45Q96K62 511 aaPredicted RBP20.13■□□□□ 0.81
SDF4-201ENST00000263741 TIGD1Q96MW7 591 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 APOL6Q9BWW8 343 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 NXF3Q9H4D5 531 aaKnown RBP20.13■□□□□ 0.81
SDF4-201ENST00000263741 C1orf112Q9NSG2 853 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 EXOC1Q9NV70 894 aa20.13■□□□□ 0.81
SDF4-201ENST00000263741 MYO9BQ13459 2157 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 A0A1B0GUA9 196 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 GTF2BQ00403 316 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 NCBP1Q09161 790 aaKnown RBP20.12■□□□□ 0.81
SDF4-201ENST00000263741 PCBP1Q15365 356 aaKnown RBP eCLIP20.12■□□□□ 0.814e-7■■■■□ 19.5
SDF4-201ENST00000263741 ZBTB33Q86T24 672 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 TOP1MTQ969P6 601 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 ACO2Q99798 780 aaKnown RBP20.12■□□□□ 0.81
SDF4-201ENST00000263741 PCDHB2Q9Y5E7 798 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 PVALEFA0A1B0GWK0 134 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 SOX1O00570 391 aaPredicted RBP20.12■□□□□ 0.81
SDF4-201ENST00000263741 HNRNPDLO14979 420 aaKnown RBP20.12■□□□□ 0.81
SDF4-201ENST00000263741 AXLP30530 894 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 KANK3Q6NY19 840 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 KIAA0895Q8NCT3 520 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 ZBED2Q9BTP6 218 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 STRA6Q9BX79 667 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 LRFN2Q9ULH4 789 aa20.12■□□□□ 0.81
SDF4-201ENST00000263741 ANK1P16157 1881 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 A0A0U1RQF3 1178 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 LCHNA4D1U4 455 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 H0YCG3 227 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 GJB5O95377 273 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 STK4Q13043 487 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 ZNF568Q3ZCX4 644 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 SLC39A4Q6P5W5 647 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 SLC27A1Q6PCB7 646 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 NPAS4Q8IUM7 802 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 MAP4K3Q8IVH8 894 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 CRIPAKQ8N1N5 446 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 SMG8Q8ND04 991 aaKnown RBP20.11■□□□□ 0.81
SDF4-201ENST00000263741 TRIM6Q9C030 488 aaPredicted RBP20.11■□□□□ 0.81
SDF4-201ENST00000263741 KCNG1Q9UIX4 513 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 IPPQ9Y573 584 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 ZMYM2Q9UBW7 1377 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 PDCD11Q14690 1871 aaKnown RBP20.11■□□□□ 0.81
SDF4-201ENST00000263741 N4BP3O15049 544 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 MYL1P05976 194 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 PAN2Q504Q3 1202 aaKnown RBP20.11■□□□□ 0.81
SDF4-201ENST00000263741 CEP120Q8N960 986 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 HAPLN2Q9GZV7 340 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 CDT1Q9H211 546 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 RNF39Q9H2S5 420 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 ST6GALNAC4Q9H4F1 302 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 GDAQ9Y2T3 454 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 YBX2Q9Y2T7 364 aaKnown RBP20.11■□□□□ 0.81
SDF4-201ENST00000263741 PCDHB7Q9Y5E2 793 aa20.11■□□□□ 0.81
SDF4-201ENST00000263741 A0A1W2PPC1 479 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 ANKRD63C9JTQ0 380 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 TLL1O43897 1013 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 ARHGEF15O94989 841 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 LIG4P49917 911 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 ZNF598Q86UK7 904 aaKnown RBP20.1■□□□□ 0.81
SDF4-201ENST00000263741 NELFCDQ8IXH7 590 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 SMYD4Q8IYR2 804 aaPredicted RBP20.1■□□□□ 0.81
SDF4-201ENST00000263741 CCDC34Q96HJ3 373 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 PBX4Q9BYU1 374 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 RNF19AQ9NV58 838 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 HCSTQ9UBK5 93 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 PCDHA5Q9Y5H7 936 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 RALGAPA2Q2PPJ7 1873 aa20.1■□□□□ 0.81
SDF4-201ENST00000263741 ABLIM1O14639 778 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 HOXD13P35453 343 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 FAM189BP81408 668 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 SEZ6Q53EL9 994 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 ISM2Q6H9L7 571 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 SPRED2Q7Z698 418 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 PHOSPHO2Q8TCD6 241 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 CCDC51Q96ER9 411 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 YME1L1Q96TA2 773 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 TCHPQ9BT92 498 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 TMEM161AQ9NX61 479 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 TNFSF13BQ9Y275 285 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.09■□□□□ 0.81
SDF4-201ENST00000263741 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms