RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 GOLPH3LQ9H4A5 285 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 PLEKHA4Q9H4M7 779 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 BCL2L12Q9HB09 334 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 MKRN1Q9UHC7 482 aaKnown RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 GSTA1P08263 222 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 GSTA2P09210 222 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 CLTAP09496 248 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 PCNX4Q63HM2 1172 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 METTL7BQ6UX53 244 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 TTC25Q96NG3 672 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 MAGED2Q9UNF1 606 aaPredicted RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 PRRG1O14668 218 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 EIF3DO15371 548 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDH1-201ENST00000261769 SAT1P21673 171 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 ALDH7A1P49419 539 aaKnown RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 TAP1Q03518 808 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 SNX17Q15036 470 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 EDRF1Q3B7T1 1238 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 SYTL5Q8TDW5 730 aaPredicted RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 SH3TC2Q8TF17 1288 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 PRPF31Q8WWY3 499 aaKnown RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 HSPH1Q92598 858 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 DPF3Q92784 378 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 P2RX7Q99572 595 aaKnown RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 SYT17Q9BSW7 474 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 HMX1Q9NP08 348 aaPredicted RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 CYP26B1Q9NR63 512 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 PTPN22Q9Y2R2 807 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 VWA5AO00534 786 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 MOCS3O95396 460 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 KRT7P08729 469 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 PRR29P0C7W0 189 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 CA4P22748 312 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 GRIK1P39086 918 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 PNPLA4P41247 253 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 OR1G1P47890 313 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 NPEPPSP55786 919 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 TSTA3Q13630 321 aaPredicted RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 RGMBQ6NW40 437 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 DIS3Q9Y2L1 958 aaKnown RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 SLC4A1P02730 911 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 KPNA2P52292 529 aaKnown RBP14.86□□□□□ -0.03
CDH1-201ENST00000261769 ELF2Q15723 593 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 CAPN12Q6ZSI9 719 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 ADGRA1Q86SQ6 560 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 RIOX1Q9H6W3 641 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 PXMP2Q9NR77 195 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 NEMP1O14524 444 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 ZNF189O75820 626 aaPredicted RBP14.86□□□□□ -0.03
CDH1-201ENST00000261769 STX2P32856 288 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 SNRNP35Q16560 246 aaKnown RBP14.86□□□□□ -0.03
CDH1-201ENST00000261769 RSPH14Q9UHP6 348 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 GAKO14976 1311 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 FTCDO95954 541 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 NCOA4Q13772 614 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 CRY2Q49AN0 593 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 CCDC13Q8IYE1 715 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDH1-201ENST00000261769 PTPRAP18433 802 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 SNX1Q13596 522 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 KIAA1755Q5JYT7 1200 aa14.86□□□□□ -0.03
CDH1-201ENST00000261769 RAB44Q7Z6P3 723 aaPredicted RBP14.86□□□□□ -0.03
CDH1-201ENST00000261769 SDCCAG8Q86SQ7 713 aaPredicted RBP14.86□□□□□ -0.03
CDH1-201ENST00000261769 GUCY2DQ02846 1103 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 VGLL4Q14135 290 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 MTG1Q9BT17 334 aaPredicted RBP14.85□□□□□ -0.03
CDH1-201ENST00000261769 ANGPTL3Q9Y5C1 460 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 TCRBV5S4A2TA0A5A2 114 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 RHOBTB3O94955 611 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 FAM102AQ5T9C2 384 aaPredicted RBP14.85□□□□□ -0.03
CDH1-201ENST00000261769 CD302Q8IX05 232 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 TRIM56Q9BRZ2 755 aaKnown RBP14.85□□□□□ -0.03
CDH1-201ENST00000261769 TRPV6Q9H1D0 765 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 IP6K2Q9UHH9 426 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 UBQLN1Q9UMX0 589 aaKnown RBP14.85□□□□□ -0.03
CDH1-201ENST00000261769 MSCO60682 206 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 SEC23AQ15436 765 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 ANKRD20A3Q5VUR7 823 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 SARM1Q6SZW1 724 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 MKNK1Q9BUB5 465 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
CDH1-201ENST00000261769 MED1Q15648 1581 aaPredicted RBP14.85□□□□□ -0.03
CDH1-201ENST00000261769 NPHP3-ACAD11A0A0J9YXS1 232 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 LRRC53A6NM62 1247 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 NFIBO00712 420 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 PMLP29590 882 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 ERVK-9P63128 1117 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 ERVK-24P63145 666 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 SEPT6Q14141 434 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 PDIK1LQ8N165 341 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 ACRBPQ8NEB7 543 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 DDX4Q9NQI0 724 aaKnown RBP14.84□□□□□ -0.03
CDH1-201ENST00000261769 KCNQ5Q9NR82 932 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 WDR35Q9P2L0 1181 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 HPS5Q9UPZ3 1129 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 PPME1Q9Y570 386 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 MYMKA6NI61 221 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 TROVE2P10155 538 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDH1-201ENST00000261769 TMEM60Q9H2L4 133 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms