RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CYP3A43Q9HB55 503 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 STK38LQ9Y2H1 464 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 FBXO21O94952 628 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PRLRP16471 622 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 OAS2P29728 719 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SDC4P31431 198 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 TFAMQ00059 246 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SV2CQ496J9 727 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ACAD11Q709F0 780 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 TTC8Q8TAM2 541 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 DTX3LQ8TDB6 740 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 TMX1Q9H3N1 280 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PKD2L1Q9P0L9 805 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PLA2G6O60733 806 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 GH2P01242 217 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 HPDP32754 393 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 EIF4A3P38919 411 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 MAP3K10Q02779 954 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SNRNP48Q6IEG0 339 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 DARS2Q6PI48 645 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 WDR75Q8IWA0 830 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SNF8Q96H20 258 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 FAM84BQ96KN1 310 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 TRPC7Q9HCX4 862 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 DBR1Q9UK59 544 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 APOBEC2Q9Y235 224 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 F5H6K3 240 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 PSTPIP1O43586 416 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 CCDC22O60826 627 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 STAG3L1P0CL83 205 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 CNTFP26441 200 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 KLRC3Q07444 240 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 PDCD2Q16342 344 aaPredicted RBP4.59□□□□□ -1.68
VPS13C-202ENST00000261517 KLHL7Q8IXQ5 586 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 DCP1BQ8IZD4 617 aaKnown RBP4.59□□□□□ -1.68
VPS13C-202ENST00000261517 SH3RF3Q8TEJ3 882 aaPredicted RBP4.59□□□□□ -1.68
VPS13C-202ENST00000261517 A0A0A6YYK5 440 aaPredicted RBP4.59□□□□□ -1.68
VPS13C-202ENST00000261517 A0A1B0GTH6 734 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 M0R3G1 203 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 GADD45BO75293 160 aaPredicted RBP4.59□□□□□ -1.68
VPS13C-202ENST00000261517 PRKAA2P54646 552 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 INHBEP58166 350 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 RAD51AP2Q09MP3 1159 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 ZDHHC17Q8IUH5 632 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 ADGRF4Q8IZF3 695 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 PYROXD1Q8WU10 500 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 CCDC126Q96EE4 140 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 IL17RAQ96F46 866 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 VCPKMTQ9H867 229 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 ERAP1Q9NZ08 941 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 LSM7Q9UK45 103 aaKnown RBP4.59□□□□□ -1.68
VPS13C-202ENST00000261517 PXDNQ92626 1479 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 ACAP1Q15027 740 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 DOK7Q18PE1 504 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 C7orf31Q8N865 590 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 SCYL1Q96KG9 808 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 TRAIPQ9BWF2 469 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 ADAM22Q9P0K1 906 aa4.59□□□□□ -1.68
VPS13C-202ENST00000261517 PHRF1Q9P1Y6 1649 aaKnown RBP4.59□□□□□ -1.68
VPS13C-202ENST00000261517 IFNB1P01574 187 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 RPA1P27694 616 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ARHGDIAP52565 204 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 KCNQ4P56696 695 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 C1orf228Q6PIY5 440 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ATG9AQ7Z3C6 839 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SIRT2Q8IXJ6 389 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 VCPIP1Q96JH7 1222 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 CXCL11O14625 94 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 PARNO95453 639 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MED21Q13503 144 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 CMTM5Q96DZ9 223 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 OTUB1Q96FW1 271 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 FAXDC2Q96IV6 333 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 KDM4CQ9H3R0 1056 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MAPRE3Q9UPY8 281 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 AP3M1Q9Y2T2 418 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 EXOC1LA0A1B0GW35 172 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 KIF28PB7ZC32 967 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 STRNO43815 780 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 EXTL3O43909 919 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 CLTAP09496 248 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SEPT1Q8WYJ6 367 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ERGIC2Q96RQ1 377 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 PUS3Q9BZE2 481 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 RABEP2Q9H5N1 569 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TMEM8AQ9HCN3 771 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 LRRIQ3A6PVS8 624 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 PIK3R2O00459 728 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ZW10O43264 779 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ICAM1P05362 532 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ADKP55263 362 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 AMPD2Q01433 879 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 RBL2Q08999 1139 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ZBTB17Q13105 803 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 Q4G0T1 1027 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 KCTD1Q719H9 257 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 METTL3Q86U44 580 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ANKRD13AQ8IZ07 590 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TBC1D16Q8TBP0 767 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 CEP95Q96GE4 821 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms