RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RBSNQ9H1K0 784 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 COL1A2P08123 1366 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 EXTL3O43909 919 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ATICP31939 592 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 PAPOLAP51003 745 aaKnown RBP14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ZNF75DP51815 510 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 WHAMMP3Q1A5X7 153 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ALDH2P05091 517 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 GTF2H1P32780 548 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 OR1G1P47890 313 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 NOL9Q5SY16 702 aaKnown RBP14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 PCGF5Q86SE9 256 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 SIRT2Q8IXJ6 389 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 MKL1Q969V6 931 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 PBKQ96KB5 322 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 SEPT10Q9P0V9 454 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 CTSHP09668 335 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ZNF280AP59817 542 aaPredicted RBP14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 SETDB1Q15047 1291 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 PARD3BQ8TEW8 1205 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 OLFML3Q9NRN5 406 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 RPA1P27694 616 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 GRK4P32298 578 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 HSD17B4P51659 736 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ZBED6P86452 979 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 PTPN11Q06124 597 aaPredicted RBP14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 GIT2Q14161 759 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 FBXL13Q8NEE6 735 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 UIMC1Q96RL1 719 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 CEP72Q9P209 647 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 IP6K2Q9UHH9 426 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ATF2P15336 505 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ALDH5A1P51649 535 aaPredicted RBP14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 ZNF677Q86XU0 584 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 IFT43Q96FT9 208 aa14.35□□□□□ -0.11
PRPF38A-201ENST00000257181 CHD2O14647 1828 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 MOXD2PA6NHM9 499 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 LUC7L3O95232 432 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 KRT1P04264 644 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 GEMIN4P57678 1058 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 EXOSC10Q01780 885 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 RESTQ13127 1097 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 DDX42Q86XP3 938 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 MMTAG2Q9BU76 263 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 KCNH7Q9NS40 1196 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 FAM217BQ9NTX9 383 aaPredicted RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 RAB23Q9ULC3 237 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 ANGPTL3Q9Y5C1 460 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 NRCAMQ92823 1304 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 SLC9A3R1O14745 358 aaPredicted RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 HARS2P49590 506 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 ZNF445P59923 1031 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 NR5A1Q13285 461 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 LONRF3Q496Y0 759 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 N4BP2L2Q92802 583 aaPredicted RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 PPP1R16BQ96T49 567 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 CBX8Q9HC52 389 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 RNASE9P60153 205 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 NOP14P78316 857 aaKnown RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 CYP27A1Q02318 531 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 MYBPC2Q14324 1141 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 SPRYD7Q5W111 196 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 HERC6Q8IVU3 1022 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 PIGOQ8TEQ8 1089 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 TTI1O43156 1089 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 CYP11B2P19099 503 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 C4orf19Q8IY42 314 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 C16orf45Q96MC5 204 aaPredicted RBP14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 FOPNLQ96NB1 174 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 TAAR1Q96RJ0 339 aa14.34□□□□□ -0.11
PRPF38A-201ENST00000257181 FBXO21O94952 628 aa14.33□□□□□ -0.11
PRPF38A-201ENST00000257181 INPP5BP32019 993 aa14.33□□□□□ -0.11
PRPF38A-201ENST00000257181 ATP6V0D2Q8N8Y2 350 aa14.33□□□□□ -0.11
PRPF38A-201ENST00000257181 SENP7Q9BQF6 1050 aa14.33□□□□□ -0.11
PRPF38A-201ENST00000257181 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.11
PRPF38A-201ENST00000257181 CCDC151A5D8V7 595 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 ACBD5Q5T8D3 534 aaPredicted RBP14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 CDKL3Q8IVW4 592 aaPredicted RBP14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 SP110Q9HB58 689 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 OLA1Q9NTK5 396 aaKnown RBP14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 RHOBTB3O94955 611 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 UPP2O95045 317 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 MCF2P10911 925 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 NDUFA8P51970 172 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 CTU1Q7Z7A3 348 aaKnown RBP14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 CCDC25Q86WR0 208 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 PPP4R1Q8TF05 950 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 ZNF512Q96ME7 567 aaPredicted RBP14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 MON2Q7Z3U7 1717 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 CLIC2O15247 247 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 TJP3O95049 919 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 BTG3Q14201 252 aaPredicted RBP14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 SLC45A4Q5BKX6 768 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms