RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 CREB3O43889 395 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 LRRC31Q6UY01 552 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 ARHGAP27Q6ZUM4 889 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 KIF1CO43896 1103 aaKnown RBP12.16□□□□□ -0.46
NIN-201ENST00000245441 ORC4O43929 436 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 NMT2O60551 498 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 HUS1O60921 280 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 PSMC1P62191 440 aaKnown RBP12.16□□□□□ -0.46
NIN-201ENST00000245441 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 ARHGAP18Q8N392 663 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 SMG5Q9UPR3 1016 aaKnown RBP12.16□□□□□ -0.46
NIN-201ENST00000245441 SLC16A3O15427 465 aaKnown RBP12.16□□□□□ -0.46
NIN-201ENST00000245441 PDIA2Q13087 525 aaKnown RBP12.16□□□□□ -0.46
NIN-201ENST00000245441 PDIA5Q14554 519 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 STAT4Q14765 748 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 EFTUD2Q15029 972 aaKnown RBP eCLIP12.16□□□□□ -0.46
NIN-201ENST00000245441 SLC18A3Q16572 532 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 MTBPQ96DY7 904 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
NIN-201ENST00000245441 SERPINB4P48594 390 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 CNGA3Q16281 694 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 MIGA2Q7L4E1 593 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 CATSPER4Q7RTX7 472 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 PPM1NQ8N819 430 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 TRIM62Q9BVG3 475 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 SLC26A4O43511 780 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 STAT3P40763 770 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 STXBP2Q15833 593 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 RGS9BPQ6ZS82 235 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 FAM213AQ9BRX8 229 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 CCSER1Q9C0I3 900 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 ADA2Q9NZK5 511 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 COL15A1P39059 1388 aa12.16□□□□□ -0.46
NIN-201ENST00000245441 CCDC195A0A1B0GUA6 201 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 CDH16O75309 829 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 GNAT1P11488 350 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 BCAR1P56945 870 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 LMCD1Q9NZU5 365 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 TCP11X1B4DZS4 312 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 NCK2O43639 380 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 MRPL4Q9BYD3 311 aaKnown RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 TRIM9Q9C026 710 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 ZCCHC17Q9NP64 241 aaKnown RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 MRGBPQ9NV56 204 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 RTN2O75298 545 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 ZNF394Q53GI3 561 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 THEM5Q8N1Q8 247 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 CDC26Q8NHZ8 85 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 RNF103-CHMP3A0A140T963 221 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 PRDX5P30044 214 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 GPC3P51654 580 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 ADGRF4Q8IZF3 695 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 FAM161BQ96MY7 647 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 ASPSCR1Q9BZE9 553 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 VPS11Q9H270 941 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 EMSYQ7Z589 1322 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 USP42Q9H9J4 1324 aaKnown RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 HLFQ16534 295 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 CAPRIN2Q6IMN6 1127 aaKnown RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 AP3M2P53677 418 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 CAPRIN1Q14444 709 aaKnown RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 NSUN6Q8TEA1 469 aaKnown RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 BFARQ9NZS9 450 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 ZNF211Q13398 564 aaPredicted RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 EML4Q9HC35 981 aaKnown RBP12.15□□□□□ -0.46
NIN-201ENST00000245441 SNX5Q9Y5X3 404 aa12.15□□□□□ -0.46
NIN-201ENST00000245441 PDXKO00764 312 aa12.15□□□□□ -0.47
NIN-201ENST00000245441 KRT14P02533 472 aa12.15□□□□□ -0.47
NIN-201ENST00000245441 DUOXA2Q1HG44 320 aa12.15□□□□□ -0.47
NIN-201ENST00000245441 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.47
NIN-201ENST00000245441 PPP1R37O75864 691 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 ARSEP51690 589 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 HDAC4P56524 1084 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 HABP4Q5JVS0 413 aaKnown RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 ARL2BPQ9Y2Y0 163 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 MEFVO15553 781 aaPredicted RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 AGTP01019 485 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 CYP2D6P10635 497 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 MAPRE2Q15555 327 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 DSTYKQ6XUX3 929 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 SLC13A1Q9BZW2 595 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 WWP1Q9H0M0 922 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 AMACRQ9UHK6 382 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 SLC16A4O15374 487 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 SNX19Q92543 992 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 ZFATQ9P243 1243 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 SSU72P8A0A1W2PR75 194 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms