RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 TMOD4Q9NZQ9 345 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 AFF2P51816 1311 aa12.9□□□□□ -0.35
SEC61A1-201ENST00000243253 RIPK2O43353 540 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 GJC1P36383 396 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 AUHQ13825 339 aaKnown RBP12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 RNF187Q5TA31 235 aaPredicted RBP12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 SLCO2A1Q92959 643 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 FBXO28Q9NVF7 368 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 TMEM150BA6NC51 233 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 CCT8L1PA6NM43 557 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 CACNA2D3Q8IZS8 1091 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 AGPAT1Q99943 283 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ZSWIM1Q9BR11 485 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 AMNQ9BXJ7 453 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 AGAP1Q9UPQ3 857 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 COL2A1P02458 1487 aaPredicted RBP12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 TLDC2A0PJX2 215 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 IVDP26440 423 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 SYDE2Q5VT97 1194 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ZNF746Q6NUN9 644 aaPredicted RBP12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ANKLE1Q8NAG6 615 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ERMNQ8TAM6 284 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 PSPC1Q8WXF1 523 aaKnown RBP12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 ATRNL1Q5VV63 1379 aa12.89□□□□□ -0.35
SEC61A1-201ENST00000243253 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 BFSP1Q12934 665 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 CNGA2Q16280 664 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 PPP2R5EQ16537 467 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 NBPF9Q3BBW0 867 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 GKAP1Q5VSY0 366 aaPredicted RBP12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 HVCN1Q96D96 273 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 RPS6KC1Q96S38 1066 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 MRIQ9BWK5 157 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 NEU2Q9Y3R4 380 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 SIP14410 1827 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 PARP14Q460N5 1801 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 F5H6K3 240 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 PMM2O15305 246 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 FOSP01100 380 aaPredicted RBP12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 PYGMP11217 842 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 CDR1P51861 262 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 PPP3CAQ08209 521 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 SNX24Q9Y343 169 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 GSTA1P08263 222 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 MUTP22033 750 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 CRKP46108 304 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 EXOC3L1Q86VI1 746 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 VPS36Q86VN1 386 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 DYDC2Q96IM9 177 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 EURLQ9NYK6 297 aa12.88□□□□□ -0.35
SEC61A1-201ENST00000243253 GOLGA8IPA6NC78 632 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 GOLGA8JA6NMD2 632 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 NDUFB10O96000 172 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 AGTP01019 485 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 RFX1P22670 979 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 CHRNA3P32297 505 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 VSTM1Q6UX27 236 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 SEL1LQ9UBV2 794 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 PRKAG3Q9UGI9 489 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 TISP43B9A030 160 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 MMEP08473 750 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 CGB2Q6NT52 195 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 FAM13AO94988 1023 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 RARGP13631 454 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 PLTPP55058 493 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 RIPK1Q13546 671 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 C12orf56Q8IXR9 622 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 CTNNBL1Q8WYA6 563 aaPredicted RBP12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 DDX1Q92499 740 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 EBF2Q9HAK2 575 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 KCND2Q9NZV8 630 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 ODF2LQ9ULJ1 636 aa12.87□□□□□ -0.35
SEC61A1-201ENST00000243253 ATP6V1G2O95670 118 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms