RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 MAFGO15525 162 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 PEX10O60683 326 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 SMARCA1P28370 1054 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 DNM2P50570 870 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 CUL1Q13616 776 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 RETREG2Q8NC44 543 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.37■■□□□ 1.01
HOXC13-201ENST00000243056 DNAJC9Q8WXX5 260 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 AZIN2Q96A70 460 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 MTRQ99707 1265 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 TANGO6Q9C0B7 1094 aa21.37■■□□□ 1.01
HOXC13-201ENST00000243056 GRID2IPA4D2P6 1211 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 GM2AP17900 193 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 EIF4A3P38919 411 aaKnown RBP21.36■■□□□ 1.01
HOXC13-201ENST00000243056 BPIFB4P59827 614 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 MTMR3Q13615 1198 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 Q4G0T1 1027 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 IRGCQ6NXR0 463 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 EIF1ADQ8N9N8 165 aaKnown RBP21.36■■□□□ 1.01
HOXC13-201ENST00000243056 SH3GLB2Q9NR46 395 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 EXOC1Q9NV70 894 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 PITPNM2Q9BZ72 1349 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 E7ENQ6 273 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 FTCDO95954 541 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 EIF4BP23588 611 aaKnown RBP21.36■■□□□ 1.01
HOXC13-201ENST00000243056 MMP13P45452 471 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 TNNC1P63316 161 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 TMC3Q7Z5M5 1100 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 ASAP3Q8TDY4 903 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 STK32AQ8WU08 396 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 P2RX7Q99572 595 aaKnown RBP21.36■■□□□ 1.01
HOXC13-201ENST00000243056 NMRK2Q9NPI5 230 aa21.36■■□□□ 1.01
HOXC13-201ENST00000243056 PACSIN2Q9UNF0 486 aaPredicted RBP21.36■■□□□ 1.01
HOXC13-201ENST00000243056 VCAM1P19320 739 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 IFNAR2P48551 515 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 ELP3Q9H9T3 547 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 CYP39A1Q9NYL5 469 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 TMCO1Q9UM00 188 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 SNCAIPQ9Y6H5 919 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 CCDC194A0A1B0GVG4 234 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 LCA5LO95447 670 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 EEF1GP26641 437 aaKnown RBP21.35■■□□□ 1.01
HOXC13-201ENST00000243056 CALML3P27482 149 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 ZNF658Q5TYW1 1059 aaPredicted RBP21.35■■□□□ 1.01
HOXC13-201ENST00000243056 USP38Q8NB14 1042 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 ZNF280CQ8ND82 737 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 PCMTD1Q96MG8 357 aaPredicted RBP21.35■■□□□ 1.01
HOXC13-201ENST00000243056 NOX5Q96PH1 765 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 RHBDL2Q9NX52 303 aa21.35■■□□□ 1.01
HOXC13-201ENST00000243056 USP15Q9Y4E8 981 aaPredicted RBP21.35■■□□□ 1.01
HOXC13-201ENST00000243056 BHMG1C9JSJ3 638 aaPredicted RBP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 PJA2O43164 708 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 SPATA31D3P0C874 917 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 DESP17661 470 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 HOXA13P31271 388 aaPredicted RBP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 TTC38Q5R3I4 469 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 SPATA31D4Q6ZUB0 917 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 CCNJLQ8IV13 435 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 CPXCR1Q8N123 301 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 FITM2Q8N6M3 262 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 C6orf50Q9HD87 102 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 SCOCQ9UIL1 159 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 TMEM59LQ9UK28 342 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 RPL13P26373 211 aaKnown RBP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 MAGEA1P43355 309 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 SERPINB4P48594 390 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 PTDSS1P48651 473 aaKnown RBP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 BACE1P56817 501 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 SETDB1Q15047 1291 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 TSNAXIP1Q2TAA8 658 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 AGBL1Q96MI9 1066 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 KIAA1683Q9H0B3 1180 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 NSRP1Q9H0G5 558 aaKnown RBP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 RPAP3Q9H6T3 665 aaPredicted RBP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 PPP2R3BQ9Y5P8 575 aa21.34■■□□□ 1.01
HOXC13-201ENST00000243056 BZW2Q9Y6E2 419 aaKnown RBP21.34■■□□□ 1.01
HOXC13-201ENST00000243056 FAM200BP0CF97 657 aa21.33■■□□□ 1.01
HOXC13-201ENST00000243056 ADCY7P51828 1080 aa21.33■■□□□ 1.01
HOXC13-201ENST00000243056 USP46P62068 366 aa21.33■■□□□ 1.01
HOXC13-201ENST00000243056 REXO1Q8N1G1 1221 aaKnown RBP21.33■■□□□ 1.01
HOXC13-201ENST00000243056 IQCGQ9H095 443 aaKnown RBP21.33■■□□□ 1.01
HOXC13-201ENST00000243056 CCDC134Q9H6E4 229 aa21.33■■□□□ 1.01
HOXC13-201ENST00000243056 PSTPIP2Q9H939 334 aa21.33■■□□□ 1.01
HOXC13-201ENST00000243056 INTS9Q9NV88 658 aaKnown RBP21.33■■□□□ 1.01
HOXC13-201ENST00000243056 ZNF189O75820 626 aaPredicted RBP21.33■■□□□ 1
HOXC13-201ENST00000243056 PTGDRQ13258 359 aa21.33■■□□□ 1
HOXC13-201ENST00000243056 LETM2Q2VYF4 491 aa21.33■■□□□ 1
HOXC13-201ENST00000243056 BTNL9Q6UXG8 535 aa21.33■■□□□ 1
HOXC13-201ENST00000243056 FBXO11Q86XK2 927 aa21.33■■□□□ 1
HOXC13-201ENST00000243056 GBP7Q8N8V2 638 aaPredicted RBP21.33■■□□□ 1
HOXC13-201ENST00000243056 EEF2KMTQ96G04 330 aa21.33■■□□□ 1
HOXC13-201ENST00000243056 LNPEPQ9UIQ6 1025 aa21.33■■□□□ 1
HOXC13-201ENST00000243056 IQCA1LA6NCM1 817 aa21.32■■□□□ 1
HOXC13-201ENST00000243056 EDIL3O43854 480 aa21.32■■□□□ 1
HOXC13-201ENST00000243056 AKR1B10O60218 316 aa21.32■■□□□ 1
HOXC13-201ENST00000243056 PALMO75781 387 aa21.32■■□□□ 1
HOXC13-201ENST00000243056 GSTA2P09210 222 aa21.32■■□□□ 1
HOXC13-201ENST00000243056 DEUP1Q05D60 604 aa21.32■■□□□ 1
HOXC13-201ENST00000243056 MCL1Q07820 350 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms