RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 IBSPP21815 317 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 RFX1P22670 979 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 CTNNA1P35221 906 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 MMP13P45452 471 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 MCCD1P59942 119 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 POLR2FP61218 127 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PTK7Q13308 1070 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 GKAP1Q5VSY0 366 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 MSL1Q68DK7 614 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 C3orf62Q6ZUJ4 267 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 NT5DC3Q86UY8 548 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 VPS36Q86VN1 386 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 DZIP1Q86YF9 867 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ARHGAP18Q8N392 663 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 AGAP11Q8TF27 550 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ATP8B4Q8TF62 1192 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 IFT81Q8WYA0 676 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 RAPGEF5Q92565 580 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 CGREF1Q99674 301 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ZCWPW1Q9H0M4 648 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 CARD9Q9H257 536 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ATF5Q9Y2D1 282 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 EFR3BQ9Y2G0 817 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 GAKO14976 1311 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ZSCAN5CA6NGD5 496 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PDXKO00764 312 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 TMEM253P0C7T8 217 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PRDX5P30044 214 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 TCF7P36402 384 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 EPHA7Q15375 998 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 KCTD16Q68DU8 428 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 HVCN1Q96D96 273 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 CHMP6Q96FZ7 201 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ZNF317Q96PQ6 595 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PLIN2Q99541 437 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ZDHHC18Q9NUE0 388 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 CETN3O15182 167 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 SLC37A4O43826 429 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 DIAPH2O60879 1101 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 AFPP02771 609 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 SP100P23497 879 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 GUCY2FP51841 1108 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 RPS8P62241 208 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PPATQ06203 517 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 SLC15A2Q16348 729 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 DUPD1Q68J44 220 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ZNF571Q7Z3V5 609 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 METTL13Q8N6R0 699 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 STKLD1Q8NE28 680 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 MORC4Q8TE76 937 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 SCFD1Q8WVM8 642 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 XPO6Q96QU8 1125 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 STMN4Q9H169 189 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 SIX2Q9NPC8 291 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PARP2Q9UGN5 583 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 TMEM110-MUSTN1A8MSY1 372 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 KCNK3O14649 394 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 P4HA2O15460 535 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 OAS1P00973 400 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 AGTP01019 485 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 LDHBP07195 334 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 ALAS1P13196 640 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PDE6BP35913 854 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 RAPGEF1Q13905 1077 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 WDR78Q5VTH9 848 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 MFSD5Q6N075 450 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 SH3RF3Q8TEJ3 882 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 HAS1Q92839 578 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 CELF1Q92879 486 aaKnown RBP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PTPRN2Q92932 1015 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 MKNK1Q9BUB5 465 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 NEUROG2Q9H2A3 272 aa6.76□□□□□ -1.33
SGIP1-201ENST00000237247 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.76□□□□□ -1.33
SGIP1-201ENST00000237247 PLXNA1Q9UIW2 1896 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 PFASO15067 1338 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 ESYT3A0FGR9 886 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 USP17L3A6NCW0 530 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 USP17L4A6NCW7 530 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 TRAF5O00463 557 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 EIF3DO15371 548 aaKnown RBP eCLIP6.75□□□□□ -1.33
SGIP1-201ENST00000237247 DDX3YO15523 660 aaKnown RBP6.75□□□□□ -1.33
SGIP1-201ENST00000237247 CALUO43852 315 aaPredicted RBP6.75□□□□□ -1.33
SGIP1-201ENST00000237247 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
SGIP1-201ENST00000237247 UCHL3P15374 230 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 LMNB1P20700 586 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 ATP6V1C1P21283 382 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 TXKP42681 527 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 CDK8P49336 464 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 SEC24CP53992 1094 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 SLC12A3P55017 1021 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 GPSM2P81274 684 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 PTK2Q05397 1052 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 C11orf63Q6NUN7 778 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 USP17L1Q7RTZ2 530 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 KCNK18Q7Z418 384 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 ZNF554Q86TJ5 538 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 LMNTD2Q8IXW0 634 aa6.75□□□□□ -1.33
SGIP1-201ENST00000237247 ATXN2LQ8WWM7 1075 aaKnown RBP6.75□□□□□ -1.33
SGIP1-201ENST00000237247 HPS3Q969F9 1004 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms