RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 RFC4P35249 363 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 COILP38432 576 aaPredicted RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 PIK3CAP42336 1068 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 TMED1Q13445 227 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 ASTE1Q2TB18 679 aaPredicted RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 PASD1Q8IV76 773 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 RHOT2Q8IXI1 618 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 PALM2Q8IXS6 379 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 KIFAP3Q92845 792 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 ZMYND8Q9ULU4 1186 aaPredicted RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 KIAA0391O15091 583 aaKnown RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 PYGMP11217 842 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 TAL1P17542 331 aaPredicted RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 HSPA1LP34931 641 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 MMP13P45452 471 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 KDSRQ06136 332 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 IRF2BP2Q7Z5L9 587 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 MTDHQ86UE4 582 aaKnown RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 TXNRD3Q86VQ6 643 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 MARCOQ9UEW3 520 aaPredicted RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 CTDP1Q9Y5B0 961 aaPredicted RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 TAF1BQ53T94 588 aaPredicted RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 IZUMO3Q5VZ72 239 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 ZNF804AQ7Z570 1209 aa15.53■□□□□ 0.08
PRDM4-201ENST00000228437 PPARGC1AQ9UBK2 798 aaKnown RBP15.53■□□□□ 0.08
PRDM4-201ENST00000228437 MYO3BQ8WXR4 1341 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 TCRBV7S2A1N4TA0A589 114 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 ATP9AO75110 1047 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 COG2Q14746 738 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 PGM2Q96G03 612 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 KIAA1683Q9H0B3 1180 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 BCAS3Q9H6U6 928 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 NKX1-2Q9UD57 310 aaPredicted RBP15.52■□□□□ 0.08
PRDM4-201ENST00000228437 AGTPBP1Q9UPW5 1226 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 MED24O75448 989 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 RARGP13631 454 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 ETS2P15036 469 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 HSPA6P17066 643 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 EPHB1P54762 984 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 AGPAT1Q99943 283 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 ANO3Q9BYT9 981 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 ANKRD2Q9GZV1 360 aa15.52■□□□□ 0.08
PRDM4-201ENST00000228437 NWD1Q149M9 1564 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 CCDC195A0A1B0GUA6 201 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 PTDSS1P48651 473 aaKnown RBP15.52■□□□□ 0.07
PRDM4-201ENST00000228437 THOC5Q13769 683 aaKnown RBP15.52■□□□□ 0.07
PRDM4-201ENST00000228437 BBS9Q3SYG4 887 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 ZBED8Q8IZ13 594 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 MIPOL1Q8TD10 442 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 MKNK1Q9BUB5 465 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 PIDD1Q9HB75 910 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 NAALADL1Q9UQQ1 740 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 PFASO15067 1338 aa15.52■□□□□ 0.07
PRDM4-201ENST00000228437 FAM47DPA6NHR8 397 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 MIF4GDA9UHW6 222 aaKnown RBP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 ANKRD63C9JTQ0 380 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 SGK1O00141 431 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 HLA-DOAP06340 250 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 RASA1P20936 1047 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CALB2P22676 271 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 FRMD5Q7Z6J6 570 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 AGGF1Q8N302 714 aaeCLIP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 RBM15Q96T37 977 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 RUSC1Q9BVN2 902 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 AFF2P51816 1311 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CREB3O43889 395 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 ZBED4O75132 1171 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 LCA5LO95447 670 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 TMEM132AQ24JP5 1023 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 ZNF572Q7Z3I7 529 aaPredicted RBP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 PALB2Q86YC2 1186 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 RAB3IL1Q8TBN0 382 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 GANQ9H2C0 597 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 RNPEPL1Q9HAU8 725 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 IGSF9BQ9UPX0 1349 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 TMEM253P0C7T8 217 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 PECAM1P16284 738 aaPredicted RBP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CD58P19256 250 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 MARK3P27448 753 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 SNX30Q5VWJ9 437 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CEP70Q8NHQ1 597 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 SNRNP27Q8WVK2 155 aaKnown RBP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 ZNF317Q96PQ6 595 aaPredicted RBP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 TBC1D10AQ9BXI6 508 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 VCX3BQ9H321 246 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 SYNCQ9H7C4 482 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 VCX3AQ9NNX9 186 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CORO1CQ9ULV4 474 aaPredicted RBP15.51■□□□□ 0.07
PRDM4-201ENST00000228437 EMSYQ7Z589 1322 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CDH16O75309 829 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 TRPA1O75762 1119 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CALCAP01258 141 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 CHKAP35790 457 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 FMO5P49326 533 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 GTF2IP78347 998 aa15.51■□□□□ 0.07
PRDM4-201ENST00000228437 DAB2IPQ5VWQ8 1189 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms