RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 NMT1P30419 496 aaKnown RBP16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 GRIN2CQ14957 1233 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 CLLU1OSQ5K130 101 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 ATF7IP2Q5U623 682 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 EEF1DP3Q658K8 133 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 GRAMD1CQ8IYS0 662 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 CMTR2Q8IYT2 770 aaKnown RBP16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 HELQQ8TDG4 1101 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 ARNTL2Q8WYA1 636 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 PGBD4Q96DM1 585 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 MRPL4Q9BYD3 311 aaKnown RBP16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 TRIM9Q9C026 710 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 BLZF1Q9H2G9 400 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 MAGEF1Q9HAY2 307 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 PANK4Q9NVE7 773 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 TBC1D7Q9P0N9 293 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 IPPQ9Y573 584 aa16.15■□□□□ 0.18
PCOLCE-201ENST00000223061 GBF1Q92538 1859 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 H0YCG3 227 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 SLFN14P0C7P3 912 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 GAP43P17677 238 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 CASP1P29466 404 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 ASIC1P78348 528 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 HERC4Q5GLZ8 1057 aaPredicted RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 SMG8Q8ND04 991 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 TGS1Q96RS0 853 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 C17orf80Q9BSJ5 609 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 TARS2Q9BW92 718 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 TMEM117Q9H0C3 514 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 NXF3Q9H4D5 531 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 MRPL42Q9Y6G3 142 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 FAM237AA0A1B0GTK4 181 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 ITGA4P13612 1032 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 CSPP1Q1MSJ5 1256 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 MRPL10Q7Z7H8 261 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 CCDC65Q8IXS2 484 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 BICD1Q96G01 975 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 CASD1Q96PB1 797 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 FIZ1Q96SL8 496 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 ACO2Q99798 780 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 PRDM12Q9H4Q4 367 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 MRPL44Q9H9J2 332 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 HCSTQ9UBK5 93 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
PCOLCE-201ENST00000223061 COL4A6Q14031 1691 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 ZC2HC1CQ53FD0 456 aaPredicted RBP16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 SPOUT1Q5T280 376 aaKnown RBP16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 GLB1LQ6UWU2 654 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 AGMOQ6ZNB7 445 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 HACE1Q8IYU2 909 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 PAGE5Q96GU1 130 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 C7orf25Q9BPX7 421 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 MTMR10Q9NXD2 777 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 SEL1LQ9UBV2 794 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 USP25Q9UHP3 1055 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 TBX20Q9UMR3 447 aa16.13■□□□□ 0.17
PCOLCE-201ENST00000223061 FRMD3A2A2Y4 597 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 EPOPA6NHQ4 379 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 RFXAPO00287 272 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 AKAP5P24588 427 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 CTNNB1P35222 781 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 ERVK-21P61565 698 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 COASYQ13057 564 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 CUL4BQ13620 913 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 ZBTB33Q86T24 672 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 HPS3Q969F9 1004 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 GUCD1Q96NT3 240 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 TCHPQ9BT92 498 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 RSAD1Q9HA92 442 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 TYW1Q9NV66 732 aaKnown RBP16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 CHD7Q9P2D1 2997 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 TNFSF13BQ9Y275 285 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 CDH23Q9H251 3354 aa16.12■□□□□ 0.17
PCOLCE-201ENST00000223061 OFD1O75665 1012 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 GCNT3O95395 438 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 HARSP12081 509 aaKnown RBP16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 DCAF4L1Q3SXM0 396 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 EPC2Q52LR7 807 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 ZNF720Q7Z2F6 126 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 TMEM192Q8IY95 271 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 LRRC43Q8N309 656 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 SLC17A8Q8NDX2 589 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 CDX2Q99626 313 aaPredicted RBP16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 PARP2Q9UGN5 583 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 TCHHQ07283 1943 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 ZNF202O95125 648 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 LINC00271P0C7V0 271 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 SCP2P22307 547 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 LIG4P49917 911 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 AFF1P51825 1210 aaKnown RBP16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 GTF2BQ00403 316 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 NOMO2Q5JPE7 1267 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 CNNM4Q6P4Q7 775 aa16.11■□□□□ 0.17
PCOLCE-201ENST00000223061 LRRC55Q6ZSA7 311 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms