RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 SCOCQ9UIL1 159 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ERVK-7P63135 1459 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 PLEKHG2Q9H7P9 1386 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 SETD1BQ9UPS6 1966 aaKnown RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 CLEC4GQ6UXB4 293 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 CCNYL1Q8N7R7 359 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 SEPT8Q92599 483 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 MTBPQ96DY7 904 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 NAF1Q96HR8 494 aaKnown RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 TMEM60Q9H2L4 133 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 RASA4BC9J798 803 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 RASA4O43374 803 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ZNF500O60304 480 aaPredicted RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 BLVRAP53004 296 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 OVOS2A0A0G2JMS6 1433 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ERBB3P21860 1342 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 TNPO2O14787 897 aaKnown RBP11.77□□□□□ -0.52
KNOP1-201ENST00000219837 ALDH1A1P00352 501 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.52
KNOP1-201ENST00000219837 PSMC5P62195 406 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 GPS1Q13098 491 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 TADA2BQ86TJ2 420 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 STRBPQ96SI9 672 aaKnown RBP11.77□□□□□ -0.52
KNOP1-201ENST00000219837 SLC13A1Q9BZW2 595 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 CCDC151A5D8V7 595 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 MAP4P27816 1152 aaKnown RBP11.77□□□□□ -0.52
KNOP1-201ENST00000219837 YWHABP31946 246 aaKnown RBP11.77□□□□□ -0.52
KNOP1-201ENST00000219837 COPB2P35606 906 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 PARD6BQ9BYG5 372 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.77□□□□□ -0.52
KNOP1-201ENST00000219837 ADAMTS1Q9UHI8 967 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.52
KNOP1-201ENST00000219837 QRICH2Q9H0J4 1663 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 PRCPP42785 496 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 AARSP49588 968 aaKnown RBP eCLIP11.77□□□□□ -0.534e-6■■■■□ 24
KNOP1-201ENST00000219837 ZNF211Q13398 564 aaPredicted RBP11.77□□□□□ -0.53
KNOP1-201ENST00000219837 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 RFWD2Q8NHY2 731 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 PITPNM3Q9BZ71 974 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 MUC3BQ9H195 1237 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
KNOP1-201ENST00000219837 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 ZSCAN9O15535 394 aaPredicted RBP11.77□□□□□ -0.53
KNOP1-201ENST00000219837 PMS2P54278 862 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 AARS2Q5JTZ9 985 aaKnown RBP11.77□□□□□ -0.53
KNOP1-201ENST00000219837 ELAC2Q9BQ52 826 aaKnown RBP11.77□□□□□ -0.53
KNOP1-201ENST00000219837 SELENONQ9NZV5 590 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 FBXL5Q9UKA1 691 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
KNOP1-201ENST00000219837 SNX24Q9Y343 169 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 PREX2Q70Z35 1606 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 GTPBP10A4D1E9 387 aaKnown RBP11.77□□□□□ -0.53
KNOP1-201ENST00000219837 CTSHP09668 335 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 KCNH2Q12809 1159 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 TFDP2Q14188 446 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 TRIML2Q8N7C3 387 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 APPL2Q8NEU8 664 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 ZNF560Q96MR9 790 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 TRIM54Q9BYV2 358 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 ADA2Q9NZK5 511 aa11.77□□□□□ -0.53
KNOP1-201ENST00000219837 A0A087WUV0 522 aaPredicted RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 DIAPH2O60879 1101 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 MMEP08473 750 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 LIFRP42702 1097 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 PPP3CCP48454 512 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 ST8SIA6P61647 398 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 CENPKQ9BS16 269 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 TRIM62Q9BVG3 475 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 ABHD10Q9NUJ1 306 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 PARVAQ9NVD7 372 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 ATP9BO43861 1147 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 LMNAP02545 664 aaKnown RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 KRT72Q14CN4 511 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 SYCP2LQ5T4T6 812 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 AGO2Q9UKV8 859 aaKnown RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 KRT14P02533 472 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 CHRNA5P30532 468 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 FASTKD1Q53R41 847 aaKnown RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 ZNF746Q6NUN9 644 aaPredicted RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 PKN3Q6P5Z2 889 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 WDR75Q8IWA0 830 aaKnown RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 IQCA1LA6NCM1 817 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 H7C1W4 665 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 NCK2O43639 380 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 KRT38O76015 456 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 PRKCBP05771 671 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 TPI1P60174 286 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 PDIA2Q13087 525 aaKnown RBP11.76□□□□□ -0.53
KNOP1-201ENST00000219837 NUGGCQ68CJ6 796 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 DGKHQ86XP1 1220 aa11.76□□□□□ -0.53
KNOP1-201ENST00000219837 PROM2Q8N271 834 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms