RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 SRGAP2O75044 1071 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 PIGRP01833 764 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 MARK3P27448 753 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 ADORA2AP29274 412 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 GCLCP48506 637 aaPredicted RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 MAP2K1Q02750 393 aaPredicted RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 ARHGAP44Q17R89 818 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 VPS36Q86VN1 386 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 FMNL3Q8IVF7 1028 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 POP1Q99575 1024 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 PDCL3Q9H2J4 239 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 UBE2TQ9NPD8 197 aaPredicted RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 DIS3Q9Y2L1 958 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 ZBTB42B2RXF5 422 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 K7ERI5 159 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 FOXN3O00409 490 aaPredicted RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 DDX3XO00571 662 aaKnown RBP eCLIP18.69■□□□□ 0.582e-6■□□□□ 11
RABGGTA-201ENST00000216840 ENPEPQ07075 957 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 DRP2Q13474 957 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 CAPSQ13938 189 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 BMS1Q14692 1282 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 PLCB4Q15147 1175 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 SPRYD7Q5W111 196 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 KRT39Q6A163 491 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 ALKBH5Q6P6C2 394 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 C2orf69Q8N8R5 385 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 ATP8B4Q8TF62 1192 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 FAM213AQ9BRX8 229 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 SYT11Q9BT88 431 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 EPC1Q9H2F5 836 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 TMEM8AQ9HCN3 771 aa18.69■□□□□ 0.58
RABGGTA-201ENST00000216840 CTAGE15A4D2H0 777 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 EXTL3O43909 919 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 CELF2O95319 508 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 CTAGE8P0CG41 777 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 CTAGE6Q86UF2 777 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 CTAGE4Q8IX94 777 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 SLC30A5Q8TAD4 765 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 SEMA4DQ92854 862 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 TMEM134Q9H6X4 195 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 TOPORSQ9NS56 1045 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 COQ4Q9Y3A0 265 aa18.68■□□□□ 0.58
RABGGTA-201ENST00000216840 BTNL10A8MVZ5 291 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 CCDC172P0C7W6 258 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 ZSCAN20P17040 1043 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 GTF2H1P32780 548 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 HSP90AA2PQ14568 343 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 KIF22Q14807 665 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 ABRAQ8N0Z2 381 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 LNX1Q8TBB1 728 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 PRPF31Q8WWY3 499 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 VTI1AQ96AJ9 217 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 KIAA1586Q9HCI6 787 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 SNX12Q9UMY4 172 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 ATP8B3O60423 1300 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 ZNF233A6NK53 670 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 ADCY3O60266 1144 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 NAP1L1P55209 391 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 MKRN4PQ13434 485 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 IER5Q5VY09 327 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 TAPT1Q6NXT6 567 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 USP37Q86T82 979 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 PSPC1Q8WXF1 523 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 HAPLN2Q9GZV7 340 aa18.67■□□□□ 0.58
RABGGTA-201ENST00000216840 IGKV6-21A0A0C4DH24 114 aa18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 TULP1O00294 542 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 KIAA0391O15091 583 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 STRNO43815 780 aa18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 EDN1P05305 212 aa18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 ZBTB48P10074 688 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 ARHGAP1Q07960 439 aa18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 DNAAF5Q86Y56 855 aa18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 U2AF1L4Q8WU68 220 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 ZBTB45Q96K62 511 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 PTPN18Q99952 460 aa18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 TARS2Q9BW92 718 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 SMARCAD1Q9H4L7 1026 aa18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 AGO2Q9UKV8 859 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-201ENST00000216840 DLATP10515 647 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 PRLRP16471 622 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 SLC26A2P50443 739 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 GPC3P51654 580 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 TUBB4BP68371 445 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 SLFN12LQ6IEE8 588 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 KAT5Q92993 513 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 CAPZA3Q96KX2 299 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 VTA1Q9NP79 307 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 PCDHGC5Q9Y5F6 944 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 ZNF185O15231 689 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 GAS2O43903 313 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 PALMO75781 387 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 NLRP11P59045 1033 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 MAMDC4Q6UXC1 1216 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 SV2AQ7L0J3 742 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 GLYCTKQ8IVS8 523 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 EXOC8Q8IYI6 725 aa18.65■□□□□ 0.58
RABGGTA-201ENST00000216840 FBXL13Q8NEE6 735 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms