RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 VEGFAP15692 232 aaPredicted RBP9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 PLCB3Q01970 1234 aa9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 TMEM62Q0P6H9 643 aa9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 SPIRE2Q8WWL2 714 aa9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 RFFLQ8WZ73 363 aa9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 NR1H4Q96RI1 486 aaPredicted RBP9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 MKNK1Q9BUB5 465 aa9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 ARHGEF38Q9NXL2 777 aa9.34□□□□□ -0.91
SUPT16H-201ENST00000216297 POTEMA6NI47 508 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 LAD1O00515 517 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ATP2A1O14983 1001 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ENO1P06733 434 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ITGA2BP08514 1039 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PIK3CAP42336 1068 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 EPHB1P54762 984 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 KRT17Q04695 432 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PUM3Q15397 648 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ASTE1Q2TB18 679 aaPredicted RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 NANOGNBQ7Z5D8 188 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ZNF444Q8N0Y2 327 aaPredicted RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PPP1R14CQ8TAE6 165 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 BTBD10Q9BSF8 475 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ERVK-5Q9HDB9 667 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 KCNMB3Q9NPA1 279 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PPARGC1AQ9UBK2 798 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 NAALADL1Q9UQQ1 740 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PCDH11XQ9BZA7 1347 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 TBX10O75333 385 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PDE8BO95263 885 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 GM2AP17900 193 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 AP1B1Q10567 949 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 SPDYCQ5MJ68 293 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 GJB7Q6PEY0 223 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 UTP4Q969X6 686 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 CCDC124Q96CT7 223 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 EMILIN3Q9NT22 766 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ZNF180Q9UJW8 692 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 TDRKHQ9Y2W6 561 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 SH3GLB1Q9Y371 365 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 WASF2Q9Y6W5 498 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 MYH6P13533 1939 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PVALEFA0A1B0GWK0 134 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 DDX3XO00571 662 aaKnown RBP eCLIP9.33□□□□□ -0.922e-50■■■□□ 19.1
SUPT16H-201ENST00000216297 STK10O94804 968 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PLS3P13797 630 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 POLD1P28340 1107 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 BCAMP50895 628 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 NEK3P51956 506 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 KLRC3Q07444 240 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 RNF207Q6ZRF8 634 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 GPBP1Q86WP2 473 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 PROM2Q8N271 834 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 GLIS3Q8NEA6 775 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ZMAT2Q96NC0 199 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 IL1RAPL1Q9NZN1 696 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
SUPT16H-201ENST00000216297 CLIC2O15247 247 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 HNRNPCL1O60812 293 aaKnown RBP9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 ZBED4O75132 1171 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 STAMBPO95630 424 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 RASA1P20936 1047 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 RPL13P26373 211 aaKnown RBP9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 TMED10P49755 219 aaKnown RBP9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 RCAN1P53805 252 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 NAT14Q8WUY8 206 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 CCDC134Q9H6E4 229 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 METTL14Q9HCE5 456 aaKnown RBP9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 USP20Q9Y2K6 914 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 CACNA1FO60840 1977 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 GOLGA8RI6L899 631 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 SMAPO00193 183 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 IRS4O14654 1257 aaPredicted RBP9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 TAC1P20366 129 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 ASPHQ12797 758 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 RASGRF1Q13972 1273 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 GSTA3Q16772 222 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 ACSBG2Q5FVE4 666 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 RDH13Q8NBN7 331 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 TBCKQ8TEA7 893 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 GJA10Q969M2 543 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 PPP2R3CQ969Q6 453 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 MTBPQ96DY7 904 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 HOMER2Q9NSB8 354 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 ZNF212Q9UDV6 495 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 ALG6Q9Y672 507 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 FAM205AQ6ZU69 1335 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 PIK3C2BO00750 1634 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 FAM208AQ9UK61 1670 aaKnown RBP9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 ARHGAP10A1A4S6 786 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 RBAK-RBAKDNI3L0D1 243 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 E2F6O75461 281 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 TSPY3P0CV98 308 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 TSPY8P0CW00 308 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 OCRLQ01968 901 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 COASYQ13057 564 aa9.32□□□□□ -0.92
SUPT16H-201ENST00000216297 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms