RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 TMEM253P0C7T8 217 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 PYGMP11217 842 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 VCAM1P19320 739 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 DRD4P21917 467 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 TRIP13Q15645 432 aaPredicted RBP17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 CEP57Q86XR8 500 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 RPUSD2Q8IZ73 545 aaKnown RBP17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 PLEKHO2Q8TD55 490 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 ADAM7Q9H2U9 754 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 KIAA0391O15091 583 aaKnown RBP17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 CYP3A4P08684 503 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 BIRC3Q13489 604 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 RASA3Q14644 834 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 DAW1Q8N136 415 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 TATDN2Q93075 761 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 ZKSCAN4Q969J2 545 aaPredicted RBP17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 FAM20AQ96MK3 541 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 AGPAT1Q99943 283 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 FBXO28Q9NVF7 368 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 CD2APQ9Y5K6 639 aa17.07■□□□□ 0.32
SNAPC1-201ENST00000216294 GAS7O60861 476 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 HIP1RO75146 1068 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 PPFIA2O75334 1257 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 MMEP08473 750 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 LMNB1P20700 586 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 COMTP21964 271 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 SCTRP47872 440 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 CACNA2D3Q8IZS8 1091 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 SEC14L1Q92503 715 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 NAP1L4Q99733 375 aaKnown RBP17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 DDX23Q9BUQ8 820 aaKnown RBP17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 TXLNGYQ9BZA5 131 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 FAM114A2Q9NRY5 505 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 GRHL1Q9NZI5 618 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 A0A0A6YYK5 440 aaPredicted RBP17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 A6NNZ2 444 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 TBC1D12O60347 775 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 SSTR3P32745 418 aaPredicted RBP17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 R3HDM1Q15032 1099 aaKnown RBP17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 TUBB8Q3ZCM7 444 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 LRRC34Q8IZ02 419 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 LMO3Q8TAP4 145 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 XPO6Q96QU8 1125 aaKnown RBP17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 GPRC5CQ9NQ84 441 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 OLFML3Q9NRN5 406 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 SYNPO2Q9UMS6 1093 aa17.06■□□□□ 0.32
SNAPC1-201ENST00000216294 PSMD10O75832 226 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 RASSF9O75901 435 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 BFSP1Q12934 665 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 MTMR3Q13615 1198 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 AGBL2Q5U5Z8 902 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 SLC47A2Q86VL8 602 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 KIRREL3Q8IZU9 778 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 ELAC2Q9BQ52 826 aaKnown RBP17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 LXNQ9BS40 222 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 POLR3CQ9BUI4 534 aaPredicted RBP17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 TRIM7Q9C029 511 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 CTNNAL1Q9UBT7 734 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 K7ENM7 598 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 ECM2O94769 699 aaPredicted RBP17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 PTGIRP43119 386 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 MMP14P50281 582 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 SEPT14Q6ZU15 432 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 HS2ST1Q7LGA3 356 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 C1orf54Q8WWF1 131 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 TLCD1Q96CP7 247 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 HVCN1Q96D96 273 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 NCANO14594 1321 aa17.05■□□□□ 0.32
SNAPC1-201ENST00000216294 CYP26A1O43174 497 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 VPS41P49754 854 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 MAPK7Q13164 816 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 TNIP1Q15025 636 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 LONRF1Q17RB8 773 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 DENND2CQ68D51 928 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 CCDC137Q6PK04 289 aaKnown RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 DHX38Q92620 1227 aaKnown RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 CEP89Q96ST8 783 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 PAGR1Q9BTK6 254 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 TBX3O15119 743 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 ACSL3O95573 720 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 PRELPP51888 382 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 DGKZQ13574 1117 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 GKAP1Q5VSY0 366 aaPredicted RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 CYB5D1Q6P9G0 228 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 YTHDF3Q7Z739 585 aaKnown RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 PRUNE1Q86TP1 453 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 NOP9Q86U38 636 aaKnown RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 FUKQ8N0W3 1084 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 C1orf131Q8NDD1 294 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms