RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 H2AFXP16104 143 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 SFNP31947 248 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 JAK3P52333 1124 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 SPA17Q15506 151 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZKSCAN8Q15776 578 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 SUPT20HL1Q3ZLR7 823 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 FAM26DQ5JW98 314 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 RSRC2Q7L4I2 434 aaKnown RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 CACNA2D4Q7Z3S7 1137 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 ANKRD23Q86SG2 305 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 MYCT1Q8N699 235 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 CEP112Q8N8E3 955 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 NLGN2Q8NFZ4 835 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 SMCR8Q8TEV9 937 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 TMEM174Q8WUU8 243 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 CRELD1Q96HD1 420 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 LSM14BQ9BX40 385 aaKnown RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 STRA6Q9BX79 667 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 GANQ9H2C0 597 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 RNF146Q9NTX7 359 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 ARHGAP20Q9P2F6 1191 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 GTPBP10A4D1E9 387 aaKnown RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 TGFB1I1O43294 461 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 AFPP02771 609 aaKnown RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 CCND2P30279 289 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 KRT76Q01546 638 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 MAPK7Q13164 816 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 RAB33AQ14088 237 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 CCDC122Q5T0U0 273 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 RRAGAQ7L523 313 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZNF720Q7Z2F6 126 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZKSCAN4Q969J2 545 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 RMDN3Q96TC7 470 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 TSPYL1Q9H0U9 437 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 GGA3Q9NZ52 723 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 MYO6Q9UM54 1294 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 SIP14410 1827 aa11.54□□□□□ -0.56
APOBEC3D-201ENST00000216099 RBAK-RBAKDNI3L0D1 243 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZBTB24O43167 697 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 SERPING1P05155 500 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 EPS15P42566 896 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 QARSP47897 775 aaKnown RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 COG2Q14746 738 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 ASTE1Q2TB18 679 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 ACBD5Q5T8D3 534 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 CATSPERGQ6ZRH7 1159 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 SRGAP1Q7Z6B7 1085 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 FAM178BQ8IXR5 827 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 PPM1EQ8WY54 764 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 NELL1Q92832 810 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 FBXL5Q9UKA1 691 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 V9GYY5 206 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 PJA2O43164 708 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 AKAP10O43572 662 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 EIF4A3P38919 411 aaKnown RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 KIF11P52732 1056 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 AMPD2Q01433 879 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 PLCB3Q01970 1234 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 TMEM95Q3KNT9 176 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 SFMBT2Q5VUG0 894 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 ARHGEF16Q5VV41 709 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 DPY19L2P1Q6NXN4 242 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 SLC9A9Q8IVB4 645 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 C4orf19Q8IY42 314 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 RABGGTAQ92696 567 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 GOLGA1Q92805 767 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 DMAC2Q9NW81 257 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 AIPL1Q9NZN9 384 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 TMOD4Q9NZQ9 345 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZNF214Q9UL59 606 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZHX2Q9Y6X8 837 aa11.53□□□□□ -0.56
APOBEC3D-201ENST00000216099 ANO9A1A5B4 782 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZBTB39O15060 712 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 USO1O60763 962 aaKnown RBP11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 STAM2O75886 525 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 AKAP3O75969 853 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 CAPN2P17655 700 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 KIF5AQ12840 1032 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 HGSNATQ68CP4 663 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 VSIG10LQ86VR7 867 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 GPR161Q8N6U8 529 aaKnown RBP11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 ST6GALNAC4Q9H4F1 302 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 ANKEF1Q9NU02 776 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 PCDH10Q9P2E7 1040 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 EVLQ9UI08 416 aaPredicted RBP11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 GUCA1BQ9UMX6 200 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 AFG3L2Q9Y4W6 797 aa11.52□□□□□ -0.56
APOBEC3D-201ENST00000216099 WDR64B1ANS9 1081 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 DDX39AO00148 427 aaKnown RBP11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 ZNF263O14978 683 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 PGRP06401 933 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 PSMC2P35998 433 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms