RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Nyap1Q6PFX7 833 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Lca5Q80ST9 704 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Kcng4Q80XM3 506 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 RadxQ8C779 850 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Olfr809Q8VEX8 328 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 AmotQ8VHG2 1126 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 St5Q924W7 1134 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Mms19Q9D071 1031 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ccdc70Q9D9B0 223 aa13.14□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 PigrO70570 771 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 GssP51855 474 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Lrfn1Q2WF71 766 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ssxb10Q6XAR7 170 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Osbpl6Q8BXR9 959 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tmem221Q8K071 230 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Sertad2Q9JJG5 309 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Nlrp5Q9R1M5 1163 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 C5P06684 1680 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gm8994E9PV04 411 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Erich2E9Q1A6 463 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gm20509G3UZF1 325 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Vav1P27870 845 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Celf1P28659 486 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ppp1r13bQ62415 1087 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tas2r109Q7M707 316 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Svs3bQ8BZH8 265 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Med21Q9CQ39 144 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 IcmtQ9EQK7 283 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gtf2iQ9ESZ8 998 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Krt17Q9QWL7 433 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tet3Q8BG87 1668 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Nup153E9Q3G8 1462 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Prss40A6H6T1 365 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Slc27a2O35488 620 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ripor1Q68FE6 1223 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Uts2bQ765I1 113 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Depdc1bQ8BH88 529 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 DcakdQ8BHC4 231 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Pnpt1Q8K1R3 783 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 HmcesQ8R1M0 353 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gdf11Q9Z1W4 405 aa13.13□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Myh7Q91Z83 1935 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Iqcj-Schip1A0A088MLT8 559 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Schip1P0DPB4 484 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 FechP22315 420 aaKnown RBP13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Mark2Q05512 776 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Aars2Q14CH7 980 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ssxb5Q6XAS2 159 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Rnaseh2bQ80ZV0 308 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Fam118bQ8C569 351 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Il17cQ8K4C5 194 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Znf830Q8R1N0 363 aaKnown RBP13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ttll1Q91V51 423 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 DcpsQ9DAR7 338 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tbx18Q9EPZ6 613 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Lgr5Q9Z1P4 907 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Qser1A2BIE1 1698 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Lrrc32G3XA59 663 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tspyl1O88852 379 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ces1cP23953 554 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Brinp3Q499E0 766 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Clca2Q8BG22 942 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Mageb18Q8BQR7 327 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 IarsQ8BU30 1262 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Epha10Q8BYG9 1007 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Med1Q925J9 1575 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ccdc13D3YV10 709 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gm44G3UW88 330 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Atf2P16951 487 aaKnown RBP13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Rpl5P47962 297 aaKnown RBP13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ppp2r5aQ6PD03 486 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ano5Q75UR0 904 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 PodnQ7TQ62 611 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Sestd1Q80UK0 696 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Susd4Q8BH32 490 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Usp1Q8BJQ2 784 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Unc5bQ8K1S3 945 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Cbwd1Q8VEH6 393 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Rasgef1cQ9D300 466 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Znf287Q9EQB9 759 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Plscr1Q9JJ00 328 aa13.12□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gm45261A0A1B0GSP6 197 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ttc38A3KMP2 465 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ildr2B5TVM2 661 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Krt18P05784 423 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Hspa1lP16627 641 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 VdrP48281 422 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Zc3h18Q0P678 948 aaKnown RBP13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ccdc125Q5U465 500 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ptpn14Q62130 1189 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Igdcc3Q8BQC3 813 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Dnajc9Q91WN1 259 aaKnown RBP13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gbp7Q91Z40 638 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Grhl1Q921D9 618 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Terb2Q9D494 218 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Uchl3Q9JKB1 230 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gm3127E9Q9P5 263 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gm3453K7N724 263 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Usp35M0QWN7 1009 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 CcnhQ61458 323 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms