RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ago2Q8CJG0 860 aaKnown RBP16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tgif2lx2Q8K5B9 231 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Polr3fQ921X6 316 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Def8Q99J78 448 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rhobtb1Q9DAK3 695 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Trpc4Q9QUQ5 974 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 GgcxQ9QYC7 757 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Usp31E9Q6Y8 1344 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Maml3D4QGC2 1135 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rnf31Q924T7 1066 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mtmr1Q9Z2C4 669 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 E230025N22RikG5E8S3 482 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fgd3O88842 733 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 IqcmQ149I8 489 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rnf123Q5XPI3 1314 aa16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mrps9Q9D7N3 390 aaKnown RBP16.45■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Hsf3D0VYS2 492 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Gm3248K7N721 186 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mgat1P27808 447 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Atxn10P28658 475 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 PorP37040 678 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 SnrpfP62307 86 aaKnown RBP16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 PRAG1Q571I4 1179 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Gramd1bQ80TI0 738 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Kbtbd13Q8C828 458 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mtss1Q8R1S4 759 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Xpo6Q924Z6 1125 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Cdk9Q99J95 372 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Cmtr1Q9DBC3 837 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Abcg8Q9DBM0 673 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Krt4P07744 525 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Parp3Q3ULW8 533 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Acot5Q6Q2Z6 421 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Peg10Q7TN75 958 aaKnown RBP16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Trim62Q80V85 475 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tigd4Q8BUZ3 513 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Yipf1Q91VU1 306 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tjap1Q9DCD5 539 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Gucy1a2F8VQK3 730 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mucl2P02815 138 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Lrrc4bP0C192 709 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 UvragQ8K245 698 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Nmrk1Q91W63 195 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Zswim7Q9CWQ2 152 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Capn9Q9D805 690 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 PigoQ9JJI6 1093 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mroh2aD3Z750 1679 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Gbp4A4UUI3 631 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Pou5f1P20263 352 aaKnown RBP16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Phactr3Q8BYK5 558 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Acat1Q8QZT1 424 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Eif3hQ91WK2 352 aaKnown RBP16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ubxn11Q9D572 484 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Snx5Q9D8U8 404 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Plcg1Q62077 1302 aa16.44■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Kansl3A2RSY1 903 aaKnown RBP16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Gm3402K7N5P2 326 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Pdha1P35486 390 aaKnown RBP16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Inpp1P49442 396 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Faf1P54731 649 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Pou6f1Q07916 301 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 RubcnlQ3TD16 648 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tnni3kQ5GIG6 834 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Samhd1Q60710 627 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Dsg1aQ61495 1057 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Arhgap30Q640N3 1101 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fam196bQ6GQV1 535 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ush1gQ80T11 461 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Dcun1d2Q8BZJ7 259 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Cacnb3P54285 484 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Llgl2Q3TJ91 1027 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Dpf2Q61103 391 aaKnown RBP16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Krt75Q8BGZ7 551 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mtmr4Q91XS1 1190 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tlcd1Q99JT6 247 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tube1Q9D6T1 475 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 BC048507Q80ZS7 89 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Cpa5Q8R4H4 436 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Nr1h3Q9Z0Y9 445 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Wdr41Q3UDP0 460 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fam102aQ78T81 392 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Alkbh8Q80Y20 664 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 WdpcpQ8C456 722 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Q8K2W9 541 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rufy4Q3TYX8 563 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Smim5Q8BT42 78 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Slc38a7Q8BWH0 463 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Bbs7Q8K2G4 715 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 OtoaQ8K561 1137 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ppp1r14cQ8R4S0 164 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Hic1Q9R1Y5 733 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Kiaa0556Q8C753 1610 aa16.43■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Skap2Q3UND0 358 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tmprss11aQ3UQ41 389 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ip6k2Q80V72 448 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 NelfcdQ922L6 591 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Zscan12Q9Z1D7 501 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Klhl41A2AUC9 606 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Eif3dO70194 548 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms