RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm20503G3UZK1 150 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 E030030I06RikJ3QML9 246 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Pitpnm1O35954 1243 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Klra7Q60654 280 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mettl25Q6NXH8 597 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Znf579Q80VM4 562 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Acad11Q80XL6 779 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Olfml3Q8BK62 406 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Sgpl1Q8R0X7 568 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Tbc1d15Q9CXF4 671 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Pold3Q9EQ28 462 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Gm13084A2A8N0 494 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 PotegA5H0M4 473 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ccdc152E9PX14 254 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Cyp27b1O35084 507 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Abi3bpQ59IW6 1179 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Cd180Q62192 661 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Tmem117Q8BH18 514 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 MtrrQ8C1A3 696 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Fam126bQ8C729 530 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Klhl11Q8CE33 709 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Castor1Q9CWQ8 331 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Arhgap8Q9CXP4 425 aa22.96■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 NcapgE9PWG6 1004 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Mark2Q05512 776 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Mbtd1Q6P5G3 631 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Dzip3Q7TPV2 1204 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Mapk15Q80Y86 549 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Cd209bQ8CJ91 325 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 PdxkQ8K183 312 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Cbwd1Q8VEH6 393 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Mtmr14Q8VEL2 648 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Tmco4Q91WU4 631 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Rnf6Q9DBU5 667 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Mbtps1Q9WTZ2 1052 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Psma7Q9Z2U0 248 aa22.95■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 PurbO35295 324 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Rapgef1Q3UHC1 1224 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 NntQ61941 1086 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Znf507Q6ZPY5 941 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 C2cd5Q7TPS5 1016 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Lmo3Q8BZL8 145 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Eif3cQ8R1B4 911 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Fubp1Q91WJ8 651 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Ttc1Q91Z38 292 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Asic2Q925H0 512 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Gtpbp4Q99ME9 634 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Smyd3Q9CWR2 428 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Cst12Q9DAN8 128 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Tmod3Q9JHJ0 352 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Ifnar1P33896 590 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Rad23aP54726 363 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 TfrcQ62351 763 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Ccser1Q8C0C4 895 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Eif4a3Q91VC3 411 aaKnown RBP22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Tmem132aQ922P8 1018 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Psmd6Q99JI4 389 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Tubb4aQ9D6F9 444 aa22.94■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Map2k1P31938 393 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 GaaP70699 953 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Klra9Q2TJJ8 266 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Lrrn2Q6PHP6 730 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Pabpc4Q6PHQ9 660 aaKnown RBP22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Taco1Q8K0Z7 294 aaKnown RBP22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Ppp1r16bQ8VHQ3 568 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Pcdhac2Q91Y09 1006 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Pcdha2Q91Y17 948 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Atp13a1Q9EPE9 1200 aaKnown RBP22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Morc1Q9WVL5 950 aa22.93■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Pds5aQ6A026 1332 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Chrna1P04756 457 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Tnnt2P50752 301 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Tmtc1Q3UV71 942 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Gas8Q60779 478 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Phlda1Q62392 405 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 F13a1Q8BH61 732 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Lin9Q8C735 542 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Slc15a5Q8CBB2 566 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Znf467Q8JZL0 594 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Iqsec1Q8R0S2 961 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Six6os1Q9CTN5 574 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Polr3eQ9CZT4 710 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Trmt10bQ9D075 318 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Alg13Q9D8C3 1166 aaKnown RBP22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 H2-OaQ9QWV1 250 aa22.92■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Zfp457L7N1X4 647 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 StrnO55106 780 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Btg4O70552 250 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 AfmO89020 608 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 EmbP21995 330 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Hoxd11P23813 323 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 PuraP42669 321 aaKnown RBP22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Actn4P57780 912 aaKnown RBP22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Krt15Q61414 452 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Skiv2lQ6NZR5 1244 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Qsox1Q8BND5 748 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Vps36Q91XD6 386 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Cdca2Q14B71 982 aaKnown RBP22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Tp53i13Q5F267 385 aa22.91■■□□□ 1.26
Ccdc88a-202ENSMUST00000109477 Xkr4Q5GH67 647 aa22.91■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms