RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Gimd1E9PW74 217 aa33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 Prl6a1O35257 230 aa33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 P04214 136 aa33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 Olfr1046Q7TR79 316 aa33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 Ccdc169Q8BXX9 214 aa33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 Ago2Q8CJG0 860 aaKnown RBP33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 Clp1Q99LI9 425 aa33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 Uchl5Q9WUP7 329 aa33.2■■■□□ 2.91
Ctdnep1-201ENSMUST00000108593 Tatdn2B7ZNL9 783 aaKnown RBP33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Sparcl1P70663 650 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 FAM120AQ6A0A9 1112 aaKnown RBP33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Dhx37Q6NZL1 1150 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Znf507Q6ZPY5 941 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Actn1Q7TPR4 892 aaKnown RBP33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Smarcal1Q8BJL0 910 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Tmem260Q8BMD6 703 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Cc2d1bQ8BRN9 848 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Phka2Q8BWJ3 1235 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Fbxl5Q8C2S5 690 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Kct2Q8K201 259 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Hspbp1Q99P31 357 aaKnown RBP33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Vmn1r65Q9EPS7 332 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 DexiQ9WUQ7 95 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Mettl1Q9Z120 268 aa33.2■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 EgfP01132 1217 aa33.19■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Rpl13P47963 211 aaKnown RBP33.19■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Mark3Q03141 753 aa33.19■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Tmem220Q8BP07 167 aa33.19■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Tmem240B2RWJ3 173 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 1700064H15RikD3Z4D4 81 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Nr2f2P43135 414 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Fam183bQ5NC57 135 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Sval3Q76I99 144 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 OgtQ8CGY8 1046 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Ankef1Q9D2J7 775 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Nr1h3Q9Z0Y9 445 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Grin2dQ03391 1323 aa33.18■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Zscan25B2RX31 543 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 DcxO88809 366 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Gna14P30677 355 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Usp25P57080 1055 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Anks1bQ8BIZ1 1259 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Ttc39bQ8BYY4 617 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 GanQ8CA72 597 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Smg8Q8VE18 991 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 PrameQ9D4Z5 464 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Dclk1Q9JLM8 756 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 1110002E22RikE0CYV9 1786 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Pds5aQ6A026 1332 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Ccdc173A0JLY1 547 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Ttc38A3KMP2 465 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Gm17535J3KMR8 224 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Yap1P46938 488 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Crtc1Q68ED7 630 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Ttc27Q8CD92 847 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Galnt15Q9D2N8 638 aa33.17■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Spata31d1aE9QA35 1336 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 1700017N19RikA0A087WPJ1 469 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Slc23a4A0A0J9YUX7 615 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 4932429P05RikA2ADI4 785 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Cfap73J3QPZ5 306 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Nek1P51954 1203 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Edem3Q2HXL6 931 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Frmd8Q3UFK8 466 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 B230104I21RikQ3USW4 141 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Cyth4Q80YW0 393 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Q8BGN9 141 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Enox1Q8BHR2 643 aaKnown RBP33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Chtf18Q8BIW9 969 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Agbl3Q8CDP0 1006 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Glis1Q8K1M4 789 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Egfl7Q9QXT5 275 aa33.16■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 SarsP26638 512 aaKnown RBP33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Scarf2P59222 833 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Cdc37Q61081 379 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Has1Q61647 583 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Adam6bQ6IMH7 756 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Drd5Q8BLD9 478 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Fam161bQ8CB59 589 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Gpc3Q8CFZ4 579 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Zcchc14Q8VIG0 956 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Syce1Q9D495 329 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Bcl11aQ9QYE3 773 aa33.15■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Cyp2b23E9Q593 491 aa33.14■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Tp53P02340 387 aa33.14■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Q8BZJ8 459 aa33.14■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Csde1Q91W50 798 aaKnown RBP33.14■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Slc15a2Q9ES07 729 aa33.14■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Tnfrsf10bQ9QZM4 381 aa33.14■■■□□ 2.9
Ctdnep1-201ENSMUST00000108593 Cetn3O35648 167 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 CcnoP0C242 352 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Tbx3P70324 741 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Znf579Q80VM4 562 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Cpsf3Q9QXK7 684 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Olfr456B2RT27 312 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Spryd3E9Q9B3 442 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Rgs2O08849 211 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Cct6aP80317 531 aaKnown RBP33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Carmil2Q3V3V9 1296 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Snx25Q3ZT31 840 aa33.13■■■□□ 2.89
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms