RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Ubxn2aQ99KJ0 258 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Asb11Q9CQ31 323 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Smyd3Q9CWR2 428 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Adam22Q9R1V6 904 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 S1pr4Q9Z0L1 386 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mettl1Q9Z120 268 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Trip11E9Q512 1976 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Osbpl7A2A716 963 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Odf2A3KGV1 830 aaKnown RBP9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Alkbh1P0CB42 389 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Zc3h15Q3TIV5 426 aaKnown RBP9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Oog4Q4G0C7 502 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 A1cfQ5YD48 595 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 HrQ61645 1182 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Sorbs1Q62417 1290 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ssxb10Q6XAR7 170 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 PodnQ7TQ62 611 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Lin9Q8C735 542 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rtp1Q8C8C1 263 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Efcab8Q8C9R9 203 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Klhl11Q8CE33 709 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tnpo2Q99LG2 887 aaKnown RBP9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 1700129C05RikQ9CQ77 218 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Zcchc17Q9ESX4 241 aaKnown RBP9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 IvdQ9JHI5 424 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ngly1Q9JI78 651 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 B4galt5Q9JMK0 388 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Pcdh15Q99PJ1 1943 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Plcg1Q62077 1302 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Slc35g2D3YVE8 412 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm4841E9QAA8 417 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm1758F6VZZ1 202 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 GclmO09172 274 aaKnown RBP9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 TyrobpO54885 114 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 En2P09066 324 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Lta4hP24527 611 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Asap3Q5U464 904 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Zfp91Q62511 572 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tspyl5Q69ZB3 406 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 KaznQ69ZS8 779 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ccdc148Q6P5U8 527 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Hook2Q7TMK6 716 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 AdalQ80SY6 360 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Slc17a8Q8BFU8 601 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Psmd5Q8BJY1 504 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mmgt1Q8K273 131 aaKnown RBP9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 PdgfdQ925I7 370 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mageb16Q9CWV4 363 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Lman1Q9D0F3 517 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tcirg1Q9JHF5 834 aa9.11□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Brca1P48754 1812 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Per1O35973 1291 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mtco1P00397 514 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Slc3a2P10852 526 aaKnown RBP9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 TxkP42682 527 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 OsbpQ3B7Z2 805 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Spdye4aQ5IBH6 268 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Cln3Q61124 438 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mcf2lQ64096 1149 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Lrig3Q6P1C6 1117 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tubb2aQ7TMM9 445 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Usp38Q8BW70 1042 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Fam118bQ8C569 351 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Znf467Q8JZL0 594 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Acot11Q8VHQ9 594 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ergic2Q9CR89 377 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tubb2bQ9CWF2 445 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Aldh1b1Q9CZS1 519 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mrpl2Q9D773 306 aaKnown RBP9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Dpp7Q9ET22 506 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mtmr1Q9Z2C4 669 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Scgb2b12S4R2L0 112 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Atad5Q4QY64 1826 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm10110D3Z5M2 615 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Clcn3P51791 818 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Slc12a2P55012 1205 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Senp1P59110 640 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Scarf2P59222 833 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 DeptorQ570Y9 409 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Sema5aQ62217 1077 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ddr2Q62371 854 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Pde1cQ64338 706 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Cdc14aQ6GQT0 603 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Nek5Q7TSC3 627 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Nucks1Q80XU3 234 aaKnown RBP9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tdp1Q8BJ37 609 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rint1Q8BZ36 792 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Prpf31Q8CCF0 499 aaKnown RBP9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Syne4Q8CII8 388 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Btbd6Q8K2J9 488 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Calml4Q91WQ9 153 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 PawrQ925B0 333 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 MlxiplQ99MZ3 864 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tsnaxip1Q99P25 704 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ctnnbl1Q9CWL8 563 aaKnown RBP9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Med10Q9CXU0 135 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Stk32bQ9JJX8 414 aa9.1□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Vmn2r77L7N2B7 854 aa9.09□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Epha3P29319 983 aa9.09□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 ProcP33587 460 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms