RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm3278L7N2D2 218 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm8271L7N2E2 218 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Casq2O09161 415 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mgat1P27808 447 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Casp2P29594 452 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zfyve27Q3TXX3 415 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ppp4r3cQ3V0Y1 813 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Samhd1Q60710 627 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Khdrbs1Q60749 443 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Stip1Q60864 543 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Itih1Q61702 907 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Adck2Q6NSR3 617 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Q8BGD0 127 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Abhd8Q8R0P8 439 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mss51Q9D5Z5 446 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Pdk2Q9JK42 407 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zfp984A2A7A2 547 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rfx8D3YU81 596 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Got1P05201 413 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 CnpP16330 420 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 S100a5P63084 93 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rasgrf2P70392 1189 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zbtb5Q7TQG0 670 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ints2Q80UK8 1198 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 A430089I19RikQ8C9W1 407 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Leng8Q8CBY3 785 aaKnown RBP10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 DnerQ8JZM4 737 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Sgms1Q8VCQ6 419 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ankrd49Q8VE42 238 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 NptxrQ99J85 493 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Adgrb1Q3UHD1 1582 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm3371F7CQW8 167 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Krt10P02535 570 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mmp20P57748 482 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Pou6f1Q07916 301 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 ItgadQ3V0T4 1168 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm13103Q4VAD2 491 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Kiaa1841Q68FF0 718 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mtrf1lQ8BJU9 373 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Lrit1Q8K099 624 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Serpinb10Q8K1K6 397 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Alas1Q8VC19 642 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zkscan3Q91VW9 553 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Dtnbp1Q91WZ8 352 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Med24Q99K74 987 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 NenfQ9CQ45 171 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tlr2Q9QUN7 784 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tk2Q9R088 270 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Crlf3Q9Z2L7 442 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Krt27Q9Z320 448 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tns2Q8CGB6 1400 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cyp2d34L7N463 504 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tsta3P23591 321 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 RcvrnP34057 202 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rps12P63323 132 aaKnown RBP10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gpr162Q3UN16 588 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Thrap3Q569Z6 951 aaKnown RBP10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gucy2fQ5SDA5 1108 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 ZyxQ62523 564 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Nlrp4eQ66X19 978 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Phf20Q8BLG0 1010 aaKnown RBP10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Dpp9Q8BVG4 862 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ubxn2aQ99KJ0 258 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cttnbp2nlQ99LJ0 638 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Iqcf1Q9D9K8 182 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Trim54Q9ERP3 366 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ercc4Q9QZD4 917 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Veph1A1A535 833 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tcp10bE9PYJ0 438 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Men1O88559 611 aaKnown RBP10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Hoxb8P09632 243 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Sem1P60897 70 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Stx1bP61264 288 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Lrch1P62046 709 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 LxnP70202 222 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Serpina1eQ00898 413 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 HdxQ14B70 692 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Wdr41Q3UDP0 460 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Klhl14Q69ZK5 630 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ccdc159Q8C963 411 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tldc1Q8K0P3 455 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ero1aQ8R180 464 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Pcdha9Q91Y11 979 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tdrd1Q99MV1 1172 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Dgcr8Q9EQM6 773 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 CenpkQ9ESN5 271 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Uchl3Q9JKB1 230 aa10.94□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm43738A0A0G2JEA5 862 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm5795E9PZN8 263 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gcnt4E9Q649 455 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Lmnb1P14733 588 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tex11Q14AT2 947 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Afap1l2Q5DTU0 825 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gpr101Q80T62 511 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Baiap3Q80TT2 1134 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Trim66Q924W6 1242 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Vwa5aQ99KC8 793 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Josd2Q9CR30 188 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 KynuQ9CXF0 464 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Sept12Q9D451 317 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 66.2 ms