RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 DnerQ8JZM4 737 aa13.69□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Lman1lQ8VCD3 505 aa13.69□□□□□ -0.22
Rnf4-201ENSMUST00000030992 SfpqQ8VIJ6 699 aaKnown RBP13.69□□□□□ -0.22
Rnf4-201ENSMUST00000030992 PlekQ9JHK5 350 aaKnown RBP13.69□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Syngap1F6SEU4 1340 aa13.69□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Myh10Q61879 1976 aaKnown RBP13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Slc1a1P51906 523 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Neurl1bQ0MW30 546 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Tspyl3Q3UYP3 334 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ctnna2Q61301 953 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Oca2Q62052 833 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Kcnt1Q6ZPR4 1224 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Rhbdf2Q80WQ6 827 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Klhl11Q8CE33 709 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 GzmnQ920S1 248 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Coro7Q9D2V7 922 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Rbm31yQ9D3U4 565 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Olr1Q9EQ09 363 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Sucla2Q9Z2I9 463 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Kiaa1522A2A7S8 1013 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 AunipE9Q6Z5 340 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 DgkkE9Q7N4 1118 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 SfnO70456 248 aaKnown RBP13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ap1g2O88512 791 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Alkbh1P0CB42 389 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ranbp1P34022 203 aaKnown RBP13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Rps12P63323 132 aaKnown RBP13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Pla2g6P97819 807 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Kctd6Q8BNL5 237 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 AsphQ8BSY0 741 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Dennd1aQ8K382 1016 aa13.68□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Fbf1A2A870 1173 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Gcnt4E9Q649 455 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ctnna1P26231 906 aaKnown RBP13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Mgat1P27808 447 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Col9a2Q07643 688 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 HelqQ2VPA6 1069 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Rgl2Q61193 778 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Rint1Q8BZ36 792 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Tsnaxip1Q99P25 704 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Drg2Q9QXB9 364 aaKnown RBP13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ppp2r3dQ9Z176 491 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 R3hdm1E9Q9Q2 1135 aaKnown RBP13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 LipeP54310 759 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 GscQ02591 256 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Eepd1Q3TGW2 569 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Map3k9Q3U1V8 1077 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Mapk4Q6P5G0 583 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Calhm6Q8C9E8 313 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Tspan8Q8R3G9 235 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Pcdhgb4Q91XX6 912 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 BrdtQ91Y44 956 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ankef1Q9D2J7 775 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Cpne8Q9DC53 577 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Usp29Q9ES63 869 aa13.67□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Mia3Q8BI84 1930 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Wdr72D3YYM4 1114 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Casp7P97864 303 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Sox13Q04891 613 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Oog3Q3UWY1 500 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Pde1cQ64338 706 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Foxo6Q70KY4 559 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Pkn2Q8BWW9 983 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ccdc169Q8BXX9 214 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Lrrc4cQ8C031 640 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Usp37Q8C0R0 979 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Spire2Q8K1S6 718 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Xab2Q9DCD2 855 aaKnown RBP13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Sv2aQ9JIS5 742 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 GgcxQ9QYC7 757 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Lrrc74aA0A1Y7VMD6 494 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Samd15F6XZJ7 620 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Tnfrsf18O35714 228 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Nptx2O70340 429 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Gdap1O88741 358 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Bcat1P24288 386 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ephb4P54761 987 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Clul1Q3ZRW6 464 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Six1Q62231 284 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Rnf187Q8BFX1 236 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Znf830Q8R1N0 363 aaKnown RBP13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Grhl1Q921D9 618 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Slc12a6Q924N4 1150 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Rtn3Q9ES97 964 aa13.66□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Myo5aQ99104 1853 aaKnown RBP13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 C2cd2E9Q3C1 696 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 4933406M09RikG3XA12 479 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ncf2O70145 525 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Pdk4O70571 412 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 PtpraP18052 829 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Nop53Q8BK35 484 aaKnown RBP13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Unc5bQ8K1S3 945 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Atp6v0a4Q920R6 833 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Pdxdc1Q99K01 787 aaKnown RBP13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Tmem174Q9DCX7 243 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Nfu1Q9QZ23 255 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Gm4297D3YWB7 211 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ccdc6D3YZP9 469 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Olfr552E9Q545 317 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Zfp457L7N1X4 647 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms