RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Lrrc38A2VDH3 298 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Hsdl2Q2TPA8 490 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm13103Q4VAD2 491 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mrpl47Q8K2Y7 252 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Dnajc9Q91WN1 259 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Sh2d4aQ9D7V1 421 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mfsd4b4J3QNS5 503 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Copb2O55029 905 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 MlxipQ2VPU4 917 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Il17raQ60943 864 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rundc3bQ6PDC0 408 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Unc5bQ8K1S3 945 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Homer3Q99JP6 356 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Smok2bQ9QYZ3 484 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Smok2aQ9QYZ6 504 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 MypnQ5DTJ9 1315 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Scgb2b21A0A087WQA9 112 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Adad1Q5SUE7 619 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 SucoQ8C341 1250 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mettl24Q8CCB5 363 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Vcpip1Q8CDG3 1220 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gnl3Q8CI11 538 aaKnown RBP10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Emilin2Q8K482 1074 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rmdn1Q9DCV4 305 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Slc5a4aQ9ET37 656 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Txnrd1Q9JMH6 613 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Polr1bP70700 1135 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ddr1Q03146 911 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ttc39dQ0VF76 604 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fam183bQ5NC57 135 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Dnajc5gQ8C632 165 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nudt12Q9DCN1 462 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Lrriq1Q0P5X1 1673 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Itga9B8JK39 1036 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pja1O55176 578 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rrp36Q3UFY0 244 aaKnown RBP10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Akap4Q60662 849 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Sik1Q60670 779 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ahcyl1Q80SW1 530 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Lrrc8dQ8BGR2 859 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 TbckQ8BM85 762 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nt5c3aQ9D020 331 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tmem47Q9JJG6 181 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Arhgef37A1IGU4 676 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Anxa8O35640 327 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cdh16O88338 830 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Soat2O88908 525 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 RnaselQ05921 735 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tmem132cQ8CEF9 1099 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ces1Q8VCC2 565 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tor1aip1Q921T2 595 aaKnown RBP10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Net1Q9Z206 595 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Simc1E9Q6E9 1354 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm13084A2A8N0 494 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pramel3A2AHA7 463 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm7903A2AWL1 463 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 AV320801A2AWL3 467 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm15023L7MUB4 467 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 DffaO54786 331 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ProcP33587 460 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Wdr41Q3UDP0 460 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 PigsQ6PD26 555 aaKnown RBP10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fam185aQ7TPD2 378 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Bag5Q8CI32 447 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Vps39Q8R5L3 886 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Katnal2Q9D3R6 539 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mapk13Q9Z1B7 366 aa10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Orc1Q9Z1N2 840 aaKnown RBP10.73□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Eno3P21550 434 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Scg3P47867 471 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Serping1P97290 504 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Plk4Q64702 925 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fra10ac1Q8BP78 315 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Slain2Q8CI08 581 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cdk8Q8R3L8 464 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Grin3bQ91ZU9 1003 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 LrgukQ9D5S7 820 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ankfn1A0A140LIW7 1083 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Lrrc63A6H694 637 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 KitP05532 979 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Usp53P15975 1069 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Grin1P35438 938 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ptgs2Q05769 604 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fam92bQ3V2J0 292 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ItgaeQ60677 1167 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 RimklbQ80WS1 387 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rps6kc1Q8BLK9 1056 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ces1dQ8VCT4 565 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Entpd5Q9WUZ9 427 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3173A6NAS3 172 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3020E9Q3J7 150 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Akr1b10G5E895 316 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm2897K7N6T7 172 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tatdn3Q3U1C6 294 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ddx55Q6ZPL9 600 aaKnown RBP10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cyp2d12Q8BVD2 504 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3411Q8C7R2 150 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pfdn1Q9CWM4 122 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Phtf1Q9QZ09 761 aa10.72□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Kiaa0232Q80U59 1396 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms