RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 PrameQ9D4Z5 464 aa11.62□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gins2Q9D600 185 aa11.62□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tmco5aQ9D9D5 303 aa11.62□□□□□ -0.55
Msh3-201ENSMUST00000022220 Serpinb6cW4VSP4 379 aa11.62□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gjb6P70689 261 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Klrb1Q0ZUP1 214 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 SpertQ32MG2 446 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 TchpQ3TVW5 497 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Taok1Q5F2E8 1001 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ankzf1Q80UU1 748 aaKnown RBP11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ttc22Q8C159 568 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 SucoQ8C341 1250 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pcdhb12Q91Y07 789 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gmcl1Q920G9 524 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mageb16Q9CWV4 363 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 4931423N10RikQ9D4J9 382 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Plcg1Q62077 1302 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mrc1Q61830 1456 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Atp2a2O55143 1044 aaKnown RBP11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 AgtP11859 477 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 ClgnP52194 611 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Lrrn4P59383 733 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tmtc1Q3UV71 942 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Nacc1Q7TSZ8 514 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 RimklbQ80WS1 387 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Rusc1Q8BG26 893 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Armc6Q8BNU0 468 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Bzw2Q91VK1 419 aaKnown RBP11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Spats2lQ91WJ7 558 aaKnown RBP11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Doc2gQ9ESN1 387 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Snx1Q9WV80 522 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Net1Q9Z206 595 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ccdc6D3YZP9 469 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm3095E9Q058 166 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Usp17ldG5E8G2 545 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Usp17lcG5E8I7 545 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Hoxa11P31311 313 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Stat4P42228 749 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ect2Q07139 913 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Slc10a5Q5PT54 434 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ush1gQ80T11 461 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ints8Q80V86 995 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Srrm3Q80WV7 648 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 E2f4Q8R0K9 410 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 AdigQ8R400 80 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Plagl2Q925T4 496 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Chmp2aQ9DB34 222 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Prl2c5Q9JLV9 222 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Kat6bQ8BRB7 1872 aa11.61□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm44503E9PYU5 387 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 StamP70297 548 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 TraddQ3U0V2 310 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ces1eQ64176 562 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tm4sf1Q64302 202 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 AdalQ80SY6 360 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Daam2Q80U19 1115 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Setdb2Q8C267 713 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Fam204aQ8C6C7 236 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 OtoaQ8K561 1137 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ascc2Q91WR3 749 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Akr1c14Q91WT7 323 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pde6cQ91ZQ1 861 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mrps9Q9D7N3 390 aaKnown RBP11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Rnf4Q9QZS2 194 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Meis2P97367 477 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Phc1Q64028 1012 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Spata24Q6P926 205 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Acot5Q6Q2Z6 421 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Znf618Q80YY7 953 aaKnown RBP11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Usp20Q8C6M1 916 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Stard7Q8R1R3 373 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Thoc1Q8R3N6 657 aaKnown RBP11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Grtp1Q9D3N8 359 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm5936A2BG95 728 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm5640A3KG49 728 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Trappc3O55013 180 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 PrkceP16054 737 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pde1bQ01065 535 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mpp4Q6P7F1 635 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Celf4Q7TSY6 486 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tom1l1Q923U0 474 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Snx24Q9CRB0 169 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 ArcQ9WV31 396 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Cib2Q9Z309 187 aa11.6□□□□□ -0.55
Msh3-201ENSMUST00000022220 Lrrc38A2VDH3 298 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Trappc11B2RXC1 1133 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ccdc170D3YXL0 722 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Krt90E9Q1Z0 538 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mtco1P00397 514 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Eno1P17182 434 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 FcgrtQ61559 365 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Cwf19l2Q8BG79 887 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 GanQ8CA72 597 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Nop56Q9D6Z1 580 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ccdc124Q9D8X2 217 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pcsk1nQ9QXV0 258 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ggps1Q9WTN0 300 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Noc2lQ9WV70 747 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Lrrc74aA0A1Y7VMD6 494 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Rasgrf1P27671 1262 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms