RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gle1Q8R322 699 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Dnajc28Q8VCE1 385 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Sdr42e1Q9D665 394 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Krt71Q9R0H5 524 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gm382B1AXN3 1250 aa20.14■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Gprasp2Q8BUY8 826 aa20.14■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Dnm1lQ8K1M6 742 aa20.14■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Slf1Q8R3P9 1054 aa20.14■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Kdm4bQ91VY5 1086 aa20.14■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 PigoQ9JJI6 1093 aa20.14■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ugt1a9Q62452 528 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Myo6Q64331 1265 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Gm5622Q810Q0 167 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 BbxQ8VBW5 907 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 MlxiplQ99MZ3 864 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Adam22Q9R1V6 904 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Slc6a16A0A1L1SR47 742 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Unc13dB2RUP2 1085 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Adcy7P51829 1099 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ttc39dQ0VF76 604 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Fdxacb1Q3UY23 622 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Miga1Q4QQM5 600 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Rhox12Q4TU81 186 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Inpp4bQ6P1Y8 924 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Fbxo43Q8CDI2 640 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Trmt10bQ9D075 318 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Tmem79Q9D709 391 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Tgm5Q9D7I9 724 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Slc5a4aQ9ET37 656 aa20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ddx20Q9JJY4 825 aaKnown RBP20.13■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Atrnl1Q6A051 1378 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Gm15448F6PZL4 682 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Flot1O08917 428 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Itgb5O70309 798 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 PrphP15331 475 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ccnd2P30280 289 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Map2k1P31938 393 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ddr1Q03146 911 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 4933427I04RikQ3V053 235 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 E2f8Q58FA4 860 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Mtus1Q5HZI1 1210 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 CbarpQ66L44 698 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Jade3Q6IE82 823 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Xpnpep1Q6P1B1 623 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Rhbdf2Q80WQ6 827 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Sugp2Q8CH09 1067 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Med15Q924H2 789 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 RptorQ8K4Q0 1335 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Bpifb9bA2AJD1 591 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Syt2P46097 422 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Cep104Q80V31 926 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Bpifb9aQ80XI7 591 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Nipa1Q8BHK1 323 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 L3mbtl3Q8BLB7 883 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Bicd1Q8BR07 835 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Pcdhb12Q91Y07 789 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Rnf6Q9DBU5 667 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Cpb2Q9JHH6 422 aa20.12■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Sbf2E9PXF8 1872 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Myo5aQ99104 1853 aaKnown RBP20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 DgkkE9Q7N4 1118 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ppp1r9aH3BJD6 1292 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 NfibP97863 570 aaKnown RBP20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 FancbQ5XJY6 703 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 SpopQ6ZWS8 374 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Usp20Q8C6M1 916 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 C130026I21RikQ8C898 291 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Mrgprx1Q8CIP3 322 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Pkn3Q8K045 878 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Spire2Q8K1S6 718 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Rnf225Q9D7D1 332 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Tjp3Q9QXY1 905 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Rasgrp1Q9Z1S3 795 aa20.11■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Cpb1B2RS76 415 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Myo1eE9Q634 1107 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 UgcgO88693 394 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Xrcc5P27641 732 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Cdc25cP48967 447 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 SnrpfP62307 86 aaKnown RBP20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Rrp36Q3UFY0 244 aaKnown RBP20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Q3UTZ3 580 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ccdc125Q5U465 500 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Pla2g4cQ64GA5 597 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Kctd6Q8BNL5 237 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Mageb18Q8BQR7 327 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 AsphQ8BSY0 741 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 CgasQ8C6L5 507 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Mill1Q8HWE7 395 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Pop1Q8K205 1045 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Irx5Q9JKQ4 484 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Patl2A2ARM1 529 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Mms22lB1AUR6 1238 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Clrn2B2RVW2 232 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 4933406M09RikG3XA12 479 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 4930544D05RikJ3QK56 214 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Eftud2O08810 971 aaKnown RBP20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Casq2O09161 415 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 AdssP46664 456 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Irx1P81068 480 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Trpm8Q8R4D5 1104 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms