RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C DTR1P38125 572 aa5.51□□□□□ -1.53
VPS4YPR173C THI2P38141 450 aa5.51□□□□□ -1.53
VPS4YPR173C TCM62P38228 572 aaKnown RBP5.51□□□□□ -1.53
VPS4YPR173C LAG1P38703 411 aa5.51□□□□□ -1.53
VPS4YPR173C PTC7P38797 343 aa5.51□□□□□ -1.53
VPS4YPR173C AIM2P39721 246 aa5.51□□□□□ -1.53
VPS4YPR173C BMT5P40493 336 aa5.51□□□□□ -1.53
VPS4YPR173C UTP25P40498 721 aaKnown RBP5.51□□□□□ -1.53
VPS4YPR173C MAD2P40958 196 aa5.51□□□□□ -1.53
VPS4YPR173C CAT5P41735 233 aa5.51□□□□□ -1.53
VPS4YPR173C PRM10P42946 383 aa5.51□□□□□ -1.53
VPS4YPR173C UBC9P50623 157 aaPredicted RBP5.51□□□□□ -1.53
VPS4YPR173C RNH70P53331 553 aa5.51□□□□□ -1.53
VPS4YPR173C YDR541CQ03049 344 aa5.51□□□□□ -1.53
VPS4YPR173C HLR1Q04429 423 aa5.51□□□□□ -1.53
VPS4YPR173C ANT1Q06497 328 aa5.51□□□□□ -1.53
VPS4YPR173C SPC3Q12133 184 aa5.51□□□□□ -1.53
VPS4YPR173C TPO4Q12256 659 aa5.51□□□□□ -1.53
VPS4YPR173C COX9P07255 59 aa5.5□□□□□ -1.53
VPS4YPR173C PUT1P09368 476 aa5.5□□□□□ -1.53
VPS4YPR173C MRP1P10662 321 aaKnown RBP5.5□□□□□ -1.53
VPS4YPR173C POT1P27796 417 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
VPS4YPR173C MRP20P32387 263 aa5.5□□□□□ -1.53
VPS4YPR173C MTH1P35198 433 aa5.5□□□□□ -1.53
VPS4YPR173C IML3P38265 245 aa5.5□□□□□ -1.53
VPS4YPR173C YEL068CP39977 110 aa5.5□□□□□ -1.53
VPS4YPR173C GIM4P40005 111 aaKnown RBP5.5□□□□□ -1.53
VPS4YPR173C YIL024CP40543 189 aa5.5□□□□□ -1.53
VPS4YPR173C ALK1P43633 760 aaKnown RBP5.5□□□□□ -1.53
VPS4YPR173C IDS2P46958 469 aa5.5□□□□□ -1.53
VPS4YPR173C LSM8P47093 109 aaKnown RBP5.5□□□□□ -1.53
VPS4YPR173C SYF2P53277 215 aaPredicted RBP5.5□□□□□ -1.53
VPS4YPR173C FYV6P53913 173 aa5.5□□□□□ -1.53
VPS4YPR173C ASI3P53983 676 aa5.5□□□□□ -1.53
VPS4YPR173C SRP1Q02821 542 aaKnown RBP5.5□□□□□ -1.53
VPS4YPR173C YPL113CQ02961 396 aa5.5□□□□□ -1.53
VPS4YPR173C ODC1Q03028 310 aa5.5□□□□□ -1.53
VPS4YPR173C SPC19Q03954 165 aa5.5□□□□□ -1.53
VPS4YPR173C YMR252CQ04814 134 aa5.5□□□□□ -1.53
VPS4YPR173C YMR310CQ04867 317 aaPredicted RBP5.5□□□□□ -1.53
VPS4YPR173C GAS2Q06135 555 aa5.5□□□□□ -1.53
VPS4YPR173C PEX30Q06169 523 aa5.5□□□□□ -1.53
VPS4YPR173C CDA2Q06703 312 aa5.5□□□□□ -1.53
VPS4YPR173C ZEO1Q08245 113 aa5.5□□□□□ -1.53
VPS4YPR173C SKI7Q08491 747 aaPredicted RBP5.5□□□□□ -1.53
VPS4YPR173C LYS21Q12122 440 aaKnown RBP5.5□□□□□ -1.53
VPS4YPR173C TRM13Q12383 476 aa5.5□□□□□ -1.53
VPS4YPR173C PRM4Q12498 284 aa5.5□□□□□ -1.53
VPS4YPR173C PCC1Q3E833 88 aa5.5□□□□□ -1.53
VPS4YPR173C HOM3P10869 527 aa5.49□□□□□ -1.53
VPS4YPR173C ARO3P14843 370 aaKnown RBP5.49□□□□□ -1.53
VPS4YPR173C STE50P25344 346 aa5.49□□□□□ -1.53
VPS4YPR173C RFA2P26754 273 aaKnown RBP5.49□□□□□ -1.53
VPS4YPR173C MRP17P28778 131 aa5.49□□□□□ -1.53
VPS4YPR173C SUA5P32579 426 aa5.49□□□□□ -1.53
VPS4YPR173C ORC2P32833 620 aa5.49□□□□□ -1.53
VPS4YPR173C ARC19P33204 171 aaKnown RBP5.49□□□□□ -1.53
VPS4YPR173C IKI1P38874 309 aa5.49□□□□□ -1.53
VPS4YPR173C BFR1P38934 470 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
VPS4YPR173C SDP1P40479 209 aa5.49□□□□□ -1.53
VPS4YPR173C ICE2P40499 491 aa5.49□□□□□ -1.53
VPS4YPR173C GTT1P40582 234 aa5.49□□□□□ -1.53
VPS4YPR173C AZF1P41696 914 aa5.49□□□□□ -1.53
VPS4YPR173C PMT6P42934 759 aa5.49□□□□□ -1.53
VPS4YPR173C SNN1P48232 102 aa5.49□□□□□ -1.53
VPS4YPR173C EMC4P53073 190 aa5.49□□□□□ -1.53
VPS4YPR173C YGR026WP53217 278 aa5.49□□□□□ -1.53
VPS4YPR173C NRK1P53915 240 aa5.49□□□□□ -1.53
VPS4YPR173C TGL2P54857 326 aa5.49□□□□□ -1.53
VPS4YPR173C YKR011CQ02209 353 aa5.49□□□□□ -1.53
VPS4YPR173C MSC1Q03104 513 aa5.49□□□□□ -1.53
VPS4YPR173C UTP15Q04305 513 aaKnown RBP5.49□□□□□ -1.53
VPS4YPR173C YLR352WQ06479 807 aa5.49□□□□□ -1.53
VPS4YPR173C YPR127WQ06494 345 aa5.49□□□□□ -1.53
VPS4YPR173C REX4Q08237 289 aa5.49□□□□□ -1.53
VPS4YPR173C YDR524C-BQ3E6R4 66 aa5.49□□□□□ -1.53
VPS4YPR173C APA2P22108 325 aa5.48□□□□□ -1.53
VPS4YPR173C PDE1P22434 369 aa5.48□□□□□ -1.53
VPS4YPR173C YSR3P23501 404 aa5.48□□□□□ -1.53
VPS4YPR173C YCR100CP25606 316 aa5.48□□□□□ -1.53
VPS4YPR173C YMC1P32331 307 aa5.48□□□□□ -1.53
VPS4YPR173C NTH1P32356 751 aa5.48□□□□□ -1.53
VPS4YPR173C MGM101P32787 269 aaKnown RBP5.48□□□□□ -1.53
VPS4YPR173C SFK1P35735 353 aa5.48□□□□□ -1.53
VPS4YPR173C YKL162CP36052 402 aa5.48□□□□□ -1.53
VPS4YPR173C TCD2P36101 447 aaKnown RBP5.48□□□□□ -1.53
VPS4YPR173C POA1P38218 177 aa5.48□□□□□ -1.53
VPS4YPR173C YHR097CP38809 366 aaKnown RBP5.48□□□□□ -1.53
VPS4YPR173C GCV3P39726 170 aaPredicted RBP5.48□□□□□ -1.53
VPS4YPR173C HEM14P40012 539 aa5.48□□□□□ -1.53
VPS4YPR173C YFR020WP43600 232 aa5.48□□□□□ -1.53
VPS4YPR173C RAD17P48581 401 aa5.48□□□□□ -1.53
VPS4YPR173C PHO23P50947 330 aa5.48□□□□□ -1.53
VPS4YPR173C COS12P53053 380 aa5.48□□□□□ -1.53
VPS4YPR173C YGL159WP53110 370 aa5.48□□□□□ -1.53
VPS4YPR173C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
VPS4YPR173C YMR279CQ03263 540 aa5.48□□□□□ -1.53
VPS4YPR173C BNA7Q04066 261 aa5.48□□□□□ -1.53
VPS4YPR173C YEH1Q07804 573 aa5.48□□□□□ -1.53
VPS4YPR173C CRT10Q08226 957 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms