RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YDR018CQ12185 396 aa2.1□□□□□ -2.07
PEP12YOR036W YPR064WQ12492 139 aa2.1□□□□□ -2.07
PEP12YOR036W FOL3Q12676 427 aaPredicted RBP2.1□□□□□ -2.07
PEP12YOR036W LAG2Q92325 660 aa2.1□□□□□ -2.07
PEP12YOR036W BI3Q9ZZW7 517 aa2.1□□□□□ -2.07
PEP12YOR036W ILV1P00927 576 aaKnown RBP2.09□□□□□ -2.07
PEP12YOR036W MSF1P08425 469 aa2.09□□□□□ -2.07
PEP12YOR036W TFS1P14306 219 aa2.09□□□□□ -2.07
PEP12YOR036W POL30P15873 258 aaKnown RBP2.09□□□□□ -2.07
PEP12YOR036W RRT12P25381 491 aa2.09□□□□□ -2.07
PEP12YOR036W INO2P26798 304 aa2.09□□□□□ -2.07
PEP12YOR036W SPS19P32573 292 aaKnown RBP2.09□□□□□ -2.07
PEP12YOR036W IES6P32617 166 aa2.09□□□□□ -2.07
PEP12YOR036W CYM1P32898 989 aa2.09□□□□□ -2.07
PEP12YOR036W GPX1P36014 167 aa2.09□□□□□ -2.07
PEP12YOR036W TAE1P38340 232 aa2.09□□□□□ -2.07
PEP12YOR036W GGC1P38988 300 aa2.09□□□□□ -2.07
PEP12YOR036W VAB2P40003 282 aa2.09□□□□□ -2.07
PEP12YOR036W RRG9P40156 214 aa2.09□□□□□ -2.07
PEP12YOR036W COA1P40452 197 aa2.09□□□□□ -2.07
PEP12YOR036W YIA6P40556 373 aa2.09□□□□□ -2.07
PEP12YOR036W YNR066CP53752 436 aa2.09□□□□□ -2.07
PEP12YOR036W MRPS16Q02608 121 aa2.09□□□□□ -2.07
PEP12YOR036W VHS1Q03785 461 aa2.09□□□□□ -2.07
PEP12YOR036W INP2Q03824 705 aa2.09□□□□□ -2.07
PEP12YOR036W GMC1Q04399 608 aa2.09□□□□□ -2.07
PEP12YOR036W API2Q04413 109 aa2.09□□□□□ -2.07
PEP12YOR036W YLR173WQ06247 608 aa2.09□□□□□ -2.07
PEP12YOR036W CTS2Q06350 511 aa2.09□□□□□ -2.07
PEP12YOR036W TAZ1Q06510 381 aa2.09□□□□□ -2.07
PEP12YOR036W POM33Q12164 279 aa2.09□□□□□ -2.07
PEP12YOR036W RRP42Q12277 265 aaPredicted RBP2.09□□□□□ -2.07
PEP12YOR036W CBP6P07253 162 aaPredicted RBP2.08□□□□□ -2.08
PEP12YOR036W ASP3-2P0CX77 362 aa2.08□□□□□ -2.08
PEP12YOR036W ASP3-3P0CX78 362 aa2.08□□□□□ -2.08
PEP12YOR036W ASP3-4P0CX79 362 aa2.08□□□□□ -2.08
PEP12YOR036W ASP3-1P0CZ17 362 aa2.08□□□□□ -2.08
PEP12YOR036W MET16P18408 261 aaPredicted RBP2.08□□□□□ -2.08
PEP12YOR036W VPH2P32341 215 aa2.08□□□□□ -2.08
PEP12YOR036W AEP1P32493 518 aa2.08□□□□□ -2.08
PEP12YOR036W IME2P32581 645 aa2.08□□□□□ -2.08
PEP12YOR036W MRPL6P32904 214 aa2.08□□□□□ -2.08
PEP12YOR036W SPT4P32914 102 aaPredicted RBP2.08□□□□□ -2.08
PEP12YOR036W SMP1P38128 452 aa2.08□□□□□ -2.08
PEP12YOR036W IBA57P47158 497 aa2.08□□□□□ -2.08
PEP12YOR036W TPN1P53099 579 aa2.08□□□□□ -2.08
PEP12YOR036W CPD1P53314 239 aa2.08□□□□□ -2.08
PEP12YOR036W YNL040WP53960 456 aaPredicted RBP2.08□□□□□ -2.08
PEP12YOR036W HAL1Q01766 294 aa2.08□□□□□ -2.08
PEP12YOR036W TRM44Q02648 567 aaKnown RBP2.08□□□□□ -2.08
PEP12YOR036W SRL4Q03085 281 aa2.08□□□□□ -2.08
PEP12YOR036W YMR209CQ03648 457 aa2.08□□□□□ -2.08
PEP12YOR036W GRX3Q03835 250 aa2.08□□□□□ -2.08
PEP12YOR036W SEC13Q04491 297 aaKnown RBP2.08□□□□□ -2.08
PEP12YOR036W BOP2Q06150 570 aa2.08□□□□□ -2.08
PEP12YOR036W PEX30Q06169 523 aa2.08□□□□□ -2.08
PEP12YOR036W VIK1Q12045 647 aa2.08□□□□□ -2.08
PEP12YOR036W MED4Q12343 284 aa2.08□□□□□ -2.08
PEP12YOR036W YOL085CQ99345 113 aa2.08□□□□□ -2.08
PEP12YOR036W TPI1P00942 248 aaKnown RBP2.07□□□□□ -2.08
PEP12YOR036W EPT1P22140 391 aa2.07□□□□□ -2.08
PEP12YOR036W PCL1P24867 279 aa2.07□□□□□ -2.08
PEP12YOR036W SUA5P32579 426 aa2.07□□□□□ -2.08
PEP12YOR036W CSE1P33307 960 aa2.07□□□□□ -2.08
PEP12YOR036W RFT1P38206 574 aaPredicted RBP2.07□□□□□ -2.08
PEP12YOR036W YBR062CP38239 180 aa2.07□□□□□ -2.08
PEP12YOR036W HSM3P38348 480 aa2.07□□□□□ -2.08
PEP12YOR036W DDI1P40087 428 aa2.07□□□□□ -2.08
PEP12YOR036W AGX1P43567 385 aa2.07□□□□□ -2.08
PEP12YOR036W YJL118WP47022 219 aa2.07□□□□□ -2.08
PEP12YOR036W YGL262WP53054 175 aa2.07□□□□□ -2.08
PEP12YOR036W YNL134CP53912 376 aaKnown RBP2.07□□□□□ -2.08
PEP12YOR036W KTR6P54070 446 aa2.07□□□□□ -2.08
PEP12YOR036W CDC14Q00684 551 aa2.07□□□□□ -2.08
PEP12YOR036W RPL21AQ02753 160 aaKnown RBP2.07□□□□□ -2.08
PEP12YOR036W YML018CQ03730 393 aa2.07□□□□□ -2.08
PEP12YOR036W RNH1Q04740 348 aa2.07□□□□□ -2.08
PEP12YOR036W ADH6Q04894 360 aaKnown RBP2.07□□□□□ -2.08
PEP12YOR036W DPP1Q05521 289 aa2.07□□□□□ -2.08
PEP12YOR036W YOR292CQ08743 309 aa2.07□□□□□ -2.08
PEP12YOR036W YOR114WQ12219 294 aa2.07□□□□□ -2.08
PEP12YOR036W YOL107WQ12239 342 aa2.07□□□□□ -2.08
PEP12YOR036W TRM10Q12400 293 aa2.07□□□□□ -2.08
PEP12YOR036W TFC7Q12415 435 aa2.07□□□□□ -2.08
PEP12YOR036W YBL111CQ3E7Y5 667 aa2.07□□□□□ -2.08
PEP12YOR036W PSK1P31374 1356 aa2.07□□□□□ -2.08
PEP12YOR036W RPP0P05317 312 aaKnown RBP2.06□□□□□ -2.08
PEP12YOR036W PET494P07390 489 aaPredicted RBP2.06□□□□□ -2.08
PEP12YOR036W VPS1P21576 704 aaKnown RBP2.06□□□□□ -2.08
PEP12YOR036W DAL81P21657 970 aa2.06□□□□□ -2.08
PEP12YOR036W CWP1P28319 239 aa2.06□□□□□ -2.08
PEP12YOR036W ZIP1P31111 875 aa2.06□□□□□ -2.08
PEP12YOR036W PRS4P38063 326 aaPredicted RBP2.06□□□□□ -2.08
PEP12YOR036W MBA1P38300 278 aa2.06□□□□□ -2.08
PEP12YOR036W MIC19P43594 170 aa2.06□□□□□ -2.08
PEP12YOR036W TAD2P47058 250 aa2.06□□□□□ -2.08
PEP12YOR036W LIA1P47120 325 aaKnown RBP2.06□□□□□ -2.08
PEP12YOR036W YGR018CP53211 109 aa2.06□□□□□ -2.08
PEP12YOR036W MNT4P53745 580 aa2.06□□□□□ -2.08
PEP12YOR036W ALG11P53954 548 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms