RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C NBP35P52920 328 aa4.22□□□□□ -1.73
EAR1YMR171C SWC4P53201 476 aa4.22□□□□□ -1.73
EAR1YMR171C ARX1Q03862 593 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C SWF1Q04629 336 aa4.22□□□□□ -1.73
EAR1YMR171C RRP45Q05636 305 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C TEN1Q07921 160 aa4.22□□□□□ -1.73
EAR1YMR171C YPQ1Q12010 308 aa4.22□□□□□ -1.73
EAR1YMR171C MTR10Q99189 972 aa4.22□□□□□ -1.73
EAR1YMR171C MET2P08465 486 aa4.21□□□□□ -1.74
EAR1YMR171C APN1P22936 367 aa4.21□□□□□ -1.74
EAR1YMR171C TRX3P25372 127 aa4.21□□□□□ -1.74
EAR1YMR171C IDH2P28241 369 aaKnown RBP4.21□□□□□ -1.74
EAR1YMR171C HOM6P31116 359 aaKnown RBP4.21□□□□□ -1.74
EAR1YMR171C VMA8P32610 256 aaKnown RBP4.21□□□□□ -1.74
EAR1YMR171C PXA2P34230 853 aa4.21□□□□□ -1.74
EAR1YMR171C UIP5P36137 443 aa4.21□□□□□ -1.74
EAR1YMR171C CBP4P37267 147 aa4.21□□□□□ -1.74
EAR1YMR171C YHR177WP38867 453 aa4.21□□□□□ -1.74
EAR1YMR171C AIM10P39965 576 aaKnown RBP4.21□□□□□ -1.74
EAR1YMR171C YEL073CP39974 107 aa4.21□□□□□ -1.74
EAR1YMR171C FMC1P40491 155 aa4.21□□□□□ -1.74
EAR1YMR171C MET28P40573 187 aa4.21□□□□□ -1.74
EAR1YMR171C HXT9P40885 567 aa4.21□□□□□ -1.74
EAR1YMR171C ECM27P47144 725 aa4.21□□□□□ -1.74
EAR1YMR171C RPS12P48589 143 aaKnown RBP4.21□□□□□ -1.74
EAR1YMR171C SDT1P53078 280 aa4.21□□□□□ -1.74
EAR1YMR171C ZRG17P53735 605 aa4.21□□□□□ -1.74
EAR1YMR171C TPS1Q00764 495 aaKnown RBP4.21□□□□□ -1.74
EAR1YMR171C YPL014WQ02606 381 aa4.21□□□□□ -1.74
EAR1YMR171C MRPS16Q02608 121 aa4.21□□□□□ -1.74
EAR1YMR171C SEG1Q04279 960 aa4.21□□□□□ -1.74
EAR1YMR171C COQ11Q05892 277 aa4.21□□□□□ -1.74
EAR1YMR171C PHO92Q06390 306 aa4.21□□□□□ -1.74
EAR1YMR171C YNL162W-AQ3E7A8 72 aa4.21□□□□□ -1.74
EAR1YMR171C LEU4P06208 619 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C RAD52P06778 471 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C PEP4P07267 405 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C SPS2P08459 502 aa4.2□□□□□ -1.74
EAR1YMR171C YGL041W-AP0C5N3 154 aa4.2□□□□□ -1.74
EAR1YMR171C PET54P10834 293 aa4.2□□□□□ -1.74
EAR1YMR171C ZWF1P11412 505 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C YIM1P28625 365 aa4.2□□□□□ -1.74
EAR1YMR171C SUR1P33300 382 aa4.2□□□□□ -1.74
EAR1YMR171C SNU114P36048 1008 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C MRPL3P36516 390 aa4.2□□□□□ -1.74
EAR1YMR171C SCO2P38072 301 aa4.2□□□□□ -1.74
EAR1YMR171C HPA3P39979 161 aa4.2□□□□□ -1.74
EAR1YMR171C GIM4P40005 111 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C YJL068CP40363 299 aa4.2□□□□□ -1.74
EAR1YMR171C PFS2P42841 465 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C YGR210CP42942 411 aa4.2□□□□□ -1.74
EAR1YMR171C APS3P47064 194 aa4.2□□□□□ -1.74
EAR1YMR171C DUO1P53168 247 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C DBP6P53734 629 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C MNT4P53745 580 aa4.2□□□□□ -1.74
EAR1YMR171C RPL6AQ02326 176 aaKnown RBP4.2□□□□□ -1.74
EAR1YMR171C YLR283WQ05867 314 aa4.2□□□□□ -1.74
EAR1YMR171C BUR2Q05949 395 aa4.2□□□□□ -1.74
EAR1YMR171C YLR173WQ06247 608 aa4.2□□□□□ -1.74
EAR1YMR171C FEX1Q08913 375 aa4.2□□□□□ -1.74
EAR1YMR171C RKM5Q12367 367 aa4.2□□□□□ -1.74
EAR1YMR171C AHC1Q12433 566 aa4.2□□□□□ -1.74
EAR1YMR171C PCL9Q12477 304 aa4.2□□□□□ -1.74
EAR1YMR171C SIR2P06700 562 aa4.19□□□□□ -1.74
EAR1YMR171C MRP2P10663 115 aaPredicted RBP4.19□□□□□ -1.74
EAR1YMR171C RED1P14291 827 aa4.19□□□□□ -1.74
EAR1YMR171C SNF6P18888 332 aa4.19□□□□□ -1.74
EAR1YMR171C AHC2P25649 128 aa4.19□□□□□ -1.74
EAR1YMR171C SNC1P31109 117 aa4.19□□□□□ -1.74
EAR1YMR171C TAF14P35189 244 aa4.19□□□□□ -1.74
EAR1YMR171C IML3P38265 245 aa4.19□□□□□ -1.74
EAR1YMR171C RPS20P38701 121 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C FAU1P40099 211 aa4.19□□□□□ -1.74
EAR1YMR171C VRG4P40107 337 aa4.19□□□□□ -1.74
EAR1YMR171C LYS12P40495 371 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C HAM1P47119 197 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C EMC4P53073 190 aa4.19□□□□□ -1.74
EAR1YMR171C ROG1P53118 685 aa4.19□□□□□ -1.74
EAR1YMR171C YGR067CP53243 804 aa4.19□□□□□ -1.74
EAR1YMR171C ERV29P53337 310 aa4.19□□□□□ -1.74
EAR1YMR171C YMR130WQ04223 302 aa4.19□□□□□ -1.74
EAR1YMR171C IPK1Q06667 281 aa4.19□□□□□ -1.74
EAR1YMR171C DCI1Q08558 271 aa4.19□□□□□ -1.74
EAR1YMR171C YOR283WQ12040 230 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C ATP16Q12165 160 aa4.19□□□□□ -1.74
EAR1YMR171C YCK1P23291 538 aa4.19□□□□□ -1.74
EAR1YMR171C KRE6P32486 720 aa4.19□□□□□ -1.74
EAR1YMR171C MKK1P32490 508 aa4.19□□□□□ -1.74
EAR1YMR171C PDR3P33200 976 aa4.19□□□□□ -1.74
EAR1YMR171C TMA19P35691 167 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C SHE2P36068 246 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74 RIP-Chip
EAR1YMR171C ANR2P36090 516 aaPredicted RBP4.19□□□□□ -1.74
EAR1YMR171C YPT35P38815 214 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C SWM2P40342 146 aa4.19□□□□□ -1.74
EAR1YMR171C SNM1P40993 198 aa4.19□□□□□ -1.74
EAR1YMR171C PSA1P41940 361 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C YFR020WP43600 232 aa4.19□□□□□ -1.74
EAR1YMR171C CTK2P46962 323 aa4.19□□□□□ -1.74
EAR1YMR171C LSM1P47017 172 aaKnown RBP4.19□□□□□ -1.74
EAR1YMR171C COS10P52924 374 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms