RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C CGI121Q03705 181 aaKnown RBP8.28□□□□□ -1.08
SEC61YLR378C SNX41Q04053 625 aa8.28□□□□□ -1.08
SEC61YLR378C MDM30Q05930 598 aa8.28□□□□□ -1.08
SEC61YLR378C LUC7Q07508 261 aaPredicted RBP8.28□□□□□ -1.08
SEC61YLR378C YOR376WQ08900 122 aa8.28□□□□□ -1.08
SEC61YLR378C COX9P07255 59 aa8.27□□□□□ -1.09
SEC61YLR378C BOS1P25385 244 aa8.27□□□□□ -1.09
SEC61YLR378C EHD3P28817 500 aa8.27□□□□□ -1.09
SEC61YLR378C HOM6P31116 359 aaKnown RBP8.27□□□□□ -1.09
SEC61YLR378C MTH1P35198 433 aa8.27□□□□□ -1.09
SEC61YLR378C TMA19P35691 167 aaKnown RBP8.27□□□□□ -1.09
SEC61YLR378C PMT6P42934 759 aa8.27□□□□□ -1.09
SEC61YLR378C OCA1P50946 238 aaPredicted RBP8.27□□□□□ -1.09
SEC61YLR378C ARO8P53090 500 aaKnown RBP8.27□□□□□ -1.09
SEC61YLR378C COX20Q04935 205 aa8.27□□□□□ -1.09
SEC61YLR378C RBS1Q05672 457 aaKnown RBP8.27□□□□□ -1.09
SEC61YLR378C RTN2Q12443 393 aa8.27□□□□□ -1.09
SEC61YLR378C YOR343CQ12484 108 aa8.27□□□□□ -1.09
SEC61YLR378C YOR032W-AQ8TGS1 66 aa8.27□□□□□ -1.09
SEC61YLR378C GCN4P03069 281 aa8.26□□□□□ -1.09
SEC61YLR378C MRP1P10662 321 aaKnown RBP8.26□□□□□ -1.09
SEC61YLR378C STE12P13574 688 aa8.26□□□□□ -1.09
SEC61YLR378C RPB8P20436 146 aa8.26□□□□□ -1.09
SEC61YLR378C STE50P25344 346 aa8.26□□□□□ -1.09
SEC61YLR378C BRR6P53062 197 aa8.26□□□□□ -1.09
SEC61YLR378C SAY1P53324 424 aa8.26□□□□□ -1.09
SEC61YLR378C PFA5Q03289 374 aa8.26□□□□□ -1.09
SEC61YLR378C YMR252CQ04814 134 aa8.26□□□□□ -1.09
SEC61YLR378C YPR109WQ06104 294 aa8.26□□□□□ -1.09
SEC61YLR378C RRP9Q06506 573 aaKnown RBP8.26□□□□□ -1.09
SEC61YLR378C BUD23P25627 275 aaPredicted RBP8.25□□□□□ -1.09
SEC61YLR378C ANR2P36090 516 aaPredicted RBP8.25□□□□□ -1.09
SEC61YLR378C POP1P41812 875 aa8.25□□□□□ -1.09
SEC61YLR378C CCC1P47818 322 aa8.25□□□□□ -1.09
SEC61YLR378C APM1Q00776 475 aaPredicted RBP8.25□□□□□ -1.09
SEC61YLR378C SCS7Q03529 384 aa8.25□□□□□ -1.09
SEC61YLR378C NUP53Q03790 475 aa8.25□□□□□ -1.09
SEC61YLR378C TSR2Q06672 205 aaKnown RBP8.25□□□□□ -1.09
SEC61YLR378C TIR4Q12218 487 aaPredicted RBP8.25□□□□□ -1.09
SEC61YLR378C RPS18AP0CX55 146 aaKnown RBP8.24□□□□□ -1.09
SEC61YLR378C RPS18BP0CX56 146 aaPredicted RBP8.24□□□□□ -1.09
SEC61YLR378C GCN3P14741 305 aa8.24□□□□□ -1.09
SEC61YLR378C ERG8P24521 451 aa8.24□□□□□ -1.09
SEC61YLR378C ITR1P30605 584 aa8.24□□□□□ -1.09
SEC61YLR378C PAU2P32612 120 aa8.24□□□□□ -1.09
SEC61YLR378C YER010CP40011 234 aa8.24□□□□□ -1.09
SEC61YLR378C NAS2P40555 220 aa8.24□□□□□ -1.09
SEC61YLR378C PAM16P42949 149 aa8.24□□□□□ -1.09
SEC61YLR378C MSE1P48525 536 aa8.24□□□□□ -1.09
SEC61YLR378C ERV29P53337 310 aa8.24□□□□□ -1.09
SEC61YLR378C MSS11Q03825 758 aa8.24□□□□□ -1.09
SEC61YLR378C BNA7Q04066 261 aa8.24□□□□□ -1.09
SEC61YLR378C HLR1Q04429 423 aa8.24□□□□□ -1.09
SEC61YLR378C RDL2Q08742 149 aaKnown RBP8.24□□□□□ -1.09
SEC61YLR378C YRA1Q12159 226 aaKnown RBP8.24□□□□□ -1.09
SEC61YLR378C FRE7Q12333 620 aa8.24□□□□□ -1.09
SEC61YLR378C MSW1P04803 379 aa8.23□□□□□ -1.09
SEC61YLR378C HIS3P06633 220 aa8.23□□□□□ -1.09
SEC61YLR378C CYT1P07143 309 aa8.23□□□□□ -1.09
SEC61YLR378C YHR214C-DP0CX93 97 aa8.23□□□□□ -1.09
SEC61YLR378C CPR2P23285 205 aa8.23□□□□□ -1.09
SEC61YLR378C SRP102P36057 244 aaPredicted RBP8.23□□□□□ -1.09
SEC61YLR378C LEU5P38702 357 aa8.23□□□□□ -1.09
SEC61YLR378C GRE3P38715 327 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
SEC61YLR378C PKP1P40530 394 aa8.23□□□□□ -1.09
SEC61YLR378C YPL039WQ03080 316 aa8.23□□□□□ -1.09
SEC61YLR378C RSM28Q03430 361 aa8.23□□□□□ -1.09
SEC61YLR378C SSY1Q03770 852 aa8.23□□□□□ -1.09
SEC61YLR378C YOR283WQ12040 230 aaKnown RBP8.23□□□□□ -1.09
SEC61YLR378C RTC5Q12108 567 aaKnown RBP8.23□□□□□ -1.09
SEC61YLR378C BRR2P32639 2163 aaKnown RBP8.22□□□□□ -1.09
SEC61YLR378C YAL064W-BO13512 126 aa8.22□□□□□ -1.09
SEC61YLR378C RPS13P05756 151 aaKnown RBP8.22□□□□□ -1.09
SEC61YLR378C DBF2P22204 572 aa8.22□□□□□ -1.09
SEC61YLR378C KRE6P32486 720 aa8.22□□□□□ -1.09
SEC61YLR378C RPC34P32910 317 aa8.22□□□□□ -1.09
SEC61YLR378C SFK1P35735 353 aa8.22□□□□□ -1.09
SEC61YLR378C PEX32P38292 413 aa8.22□□□□□ -1.09
SEC61YLR378C NIT2P47016 307 aa8.22□□□□□ -1.09
SEC61YLR378C PGU1P47180 361 aa8.22□□□□□ -1.09
SEC61YLR378C DOC1P53068 250 aa8.22□□□□□ -1.09
SEC61YLR378C YGL204CP53089 101 aa8.22□□□□□ -1.09
SEC61YLR378C YGR126WP53274 230 aa8.22□□□□□ -1.09
SEC61YLR378C YMR130WQ04223 302 aa8.22□□□□□ -1.09
SEC61YLR378C DFG5Q05031 458 aa8.22□□□□□ -1.09
SEC61YLR378C MRX8Q05473 314 aa8.22□□□□□ -1.09
SEC61YLR378C YPR147CQ06522 304 aaKnown RBP8.22□□□□□ -1.09
SEC61YLR378C SWM1Q12379 170 aa8.22□□□□□ -1.09
SEC61YLR378C SOD2P00447 233 aa8.21□□□□□ -1.09
SEC61YLR378C CDC9P04819 755 aa8.21□□□□□ -1.09
SEC61YLR378C SCO1P23833 295 aa8.21□□□□□ -1.09
SEC61YLR378C NUD1P32336 851 aa8.21□□□□□ -1.09
SEC61YLR378C SPT10P35208 640 aa8.21□□□□□ -1.09
SEC61YLR378C SRL3P36167 246 aa8.21□□□□□ -1.09
SEC61YLR378C APD1P38281 316 aa8.21□□□□□ -1.09
SEC61YLR378C OM14P38325 134 aa8.21□□□□□ -1.09
SEC61YLR378C HPA3P39979 161 aa8.21□□□□□ -1.09
SEC61YLR378C REE1P40893 198 aa8.21□□□□□ -1.09
SEC61YLR378C RPE1P46969 238 aa8.21□□□□□ -1.09
SEC61YLR378C TPN1P53099 579 aa8.21□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms