RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C MRPL20P22354 195 aaPredicted RBP1.97□□□□□ -2.09
ATG38YLR211C MEK1P24719 497 aaPredicted RBP1.97□□□□□ -2.09
ATG38YLR211C INO2P26798 304 aa1.97□□□□□ -2.09
ATG38YLR211C TPO5P36029 618 aa1.97□□□□□ -2.09
ATG38YLR211C FET3P38993 636 aa1.97□□□□□ -2.09
ATG38YLR211C MIC19P43594 170 aa1.97□□□□□ -2.09
ATG38YLR211C EMC2P47133 292 aaKnown RBP1.97□□□□□ -2.09
ATG38YLR211C GTO1P48239 356 aa1.97□□□□□ -2.09
ATG38YLR211C HSH155P49955 971 aaKnown RBP1.97□□□□□ -2.09
ATG38YLR211C SDS23P53172 527 aa1.97□□□□□ -2.09
ATG38YLR211C VOA1P53262 265 aa1.97□□□□□ -2.09
ATG38YLR211C LSB1P53281 241 aa1.97□□□□□ -2.09
ATG38YLR211C ACT1P60010 375 aaKnown RBP1.97□□□□□ -2.09
ATG38YLR211C SPO19Q03029 223 aa1.97□□□□□ -2.09
ATG38YLR211C ARV1Q06541 321 aa1.97□□□□□ -2.09
ATG38YLR211C YLL007CQ07799 665 aa1.97□□□□□ -2.09
ATG38YLR211C PAA1Q12447 191 aaKnown RBP1.97□□□□□ -2.09
ATG38YLR211C DCP1Q12517 231 aaPredicted RBP1.97□□□□□ -2.09
ATG38YLR211C MHP1P43638 1398 aa1.97□□□□□ -2.09
ATG38YLR211C SSA3P09435 649 aaKnown RBP1.96□□□□□ -2.1
ATG38YLR211C CDC42P19073 191 aa1.96□□□□□ -2.1
ATG38YLR211C ERG9P29704 444 aa1.96□□□□□ -2.1
ATG38YLR211C IML3P38265 245 aa1.96□□□□□ -2.1
ATG38YLR211C MMS21P38632 267 aa1.96□□□□□ -2.1
ATG38YLR211C CTM1P38818 585 aa1.96□□□□□ -2.1
ATG38YLR211C YHR122WP38829 231 aa1.96□□□□□ -2.1
ATG38YLR211C PEX18P38855 283 aa1.96□□□□□ -2.1
ATG38YLR211C LOC1P43586 204 aaPredicted RBP1.96□□□□□ -2.1
ATG38YLR211C YFR045WP43617 309 aa1.96□□□□□ -2.1
ATG38YLR211C PMT4P46971 762 aa1.96□□□□□ -2.1
ATG38YLR211C HIT1P46973 164 aa1.96□□□□□ -2.1
ATG38YLR211C ERV41Q04651 352 aa1.96□□□□□ -2.1
ATG38YLR211C BUR2Q05949 395 aa1.96□□□□□ -2.1
ATG38YLR211C RRG8Q06109 277 aa1.96□□□□□ -2.1
ATG38YLR211C CLP1Q08685 445 aaPredicted RBP1.96□□□□□ -2.1
ATG38YLR211C YPR063CQ12160 140 aa1.96□□□□□ -2.1
ATG38YLR211C YDR262WQ12331 272 aa1.96□□□□□ -2.1
ATG38YLR211C FMP16Q12497 93 aa1.96□□□□□ -2.1
ATG38YLR211C REP1P03871 373 aa1.95□□□□□ -2.1
ATG38YLR211C KRE1P17260 313 aa1.95□□□□□ -2.1
ATG38YLR211C SAR1P20606 190 aaKnown RBP1.95□□□□□ -2.1
ATG38YLR211C CSM1P25651 190 aa1.95□□□□□ -2.1
ATG38YLR211C ICL1P28240 557 aaPredicted RBP1.95□□□□□ -2.1
ATG38YLR211C YKL187CP34231 750 aa1.95□□□□□ -2.1
ATG38YLR211C MYO3P36006 1272 aa1.95□□□□□ -2.1
ATG38YLR211C PEX32P38292 413 aa1.95□□□□□ -2.1
ATG38YLR211C HSM3P38348 480 aa1.95□□□□□ -2.1
ATG38YLR211C SMF2P38778 549 aa1.95□□□□□ -2.1
ATG38YLR211C SPT8P38915 602 aa1.95□□□□□ -2.1
ATG38YLR211C YER084WP40057 128 aa1.95□□□□□ -2.1
ATG38YLR211C SLM1P40485 686 aa1.95□□□□□ -2.1
ATG38YLR211C YGL118CP53132 145 aa1.95□□□□□ -2.1
ATG38YLR211C YGR168CP53293 376 aa1.95□□□□□ -2.1
ATG38YLR211C YNL050CP53952 270 aa1.95□□□□□ -2.1
ATG38YLR211C ATC1Q04005 294 aa1.95□□□□□ -2.1
ATG38YLR211C GPI12P23797 304 aa1.94□□□□□ -2.1
ATG38YLR211C RPC25P35718 212 aa1.94□□□□□ -2.1
ATG38YLR211C BFR1P38934 470 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
ATG38YLR211C YIL054WP40524 105 aa1.94□□□□□ -2.1
ATG38YLR211C YJL118WP47022 219 aa1.94□□□□□ -2.1
ATG38YLR211C YNL134CP53912 376 aaKnown RBP1.94□□□□□ -2.1
ATG38YLR211C YPR1Q12458 312 aa1.94□□□□□ -2.1
ATG38YLR211C RGS2Q99188 309 aa1.94□□□□□ -2.1
ATG38YLR211C SPS100P13130 326 aa1.93□□□□□ -2.1
ATG38YLR211C RSR1P13856 272 aa1.93□□□□□ -2.1
ATG38YLR211C MSN4P33749 630 aa1.93□□□□□ -2.1
ATG38YLR211C COY1P34237 679 aa1.93□□□□□ -2.1
ATG38YLR211C YKL162CP36052 402 aa1.93□□□□□ -2.1
ATG38YLR211C MED8P38304 223 aa1.93□□□□□ -2.1
ATG38YLR211C YHR045WP38775 560 aa1.93□□□□□ -2.1
ATG38YLR211C BTT1P40314 149 aaPredicted RBP1.93□□□□□ -2.1
ATG38YLR211C UTP25P40498 721 aaKnown RBP1.93□□□□□ -2.1
ATG38YLR211C LIA1P47120 325 aaKnown RBP1.93□□□□□ -2.1
ATG38YLR211C YNL260CP53846 198 aa1.93□□□□□ -2.1
ATG38YLR211C RGM1Q00453 211 aa1.93□□□□□ -2.1
ATG38YLR211C YPL080CQ02826 108 aa1.93□□□□□ -2.1
ATG38YLR211C CWC21Q03375 135 aaKnown RBP1.93□□□□□ -2.1
ATG38YLR211C TRM10Q12400 293 aa1.93□□□□□ -2.1
ATG38YLR211C RAD7P06779 565 aa1.92□□□□□ -2.1
ATG38YLR211C IMP3P32899 183 aaPredicted RBP1.92□□□□□ -2.1
ATG38YLR211C MED6P38782 295 aa1.92□□□□□ -2.1
ATG38YLR211C ASP1P38986 381 aaPredicted RBP1.92□□□□□ -2.1
ATG38YLR211C RCY1P39531 840 aa1.92□□□□□ -2.1
ATG38YLR211C YMR134WP40207 237 aa1.92□□□□□ -2.1
ATG38YLR211C CDC40P40968 455 aaPredicted RBP1.92□□□□□ -2.1
ATG38YLR211C FMP33P46998 180 aa1.92□□□□□ -2.1
ATG38YLR211C YLR173WQ06247 608 aa1.92□□□□□ -2.1
ATG38YLR211C SAM4Q08985 325 aaKnown RBP1.92□□□□□ -2.1
ATG38YLR211C BTS1Q12051 335 aa1.92□□□□□ -2.1
ATG38YLR211C RUD3Q12234 484 aaKnown RBP1.92□□□□□ -2.1
ATG38YLR211C CFT1Q06632 1357 aaKnown RBP1.92□□□□□ -2.1
ATG38YLR211C CHD1P32657 1468 aa1.91□□□□□ -2.1
ATG38YLR211C RPL24AP04449 155 aaKnown RBP1.91□□□□□ -2.1
ATG38YLR211C ARG80P07249 177 aa1.91□□□□□ -2.1
ATG38YLR211C MSS116P15424 664 aaKnown RBP1.91□□□□□ -2.1
ATG38YLR211C DCC1P25559 380 aa1.91□□□□□ -2.1
ATG38YLR211C NTG1P31378 399 aa1.91□□□□□ -2.1
ATG38YLR211C VMA5P31412 392 aaKnown RBP1.91□□□□□ -2.1
ATG38YLR211C DOA4P32571 926 aa1.91□□□□□ -2.1
ATG38YLR211C BNA6P43619 295 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms