RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W RSF2P46974 1380 aa6.23□□□□□ -1.41
NMD5YJR132W SOD2P00447 233 aa6.23□□□□□ -1.41
NMD5YJR132W GRX2P17695 143 aaKnown RBP6.23□□□□□ -1.41
NMD5YJR132W CDC20P26309 610 aa6.23□□□□□ -1.41
NMD5YJR132W APE2P32454 952 aaKnown RBP6.23□□□□□ -1.41
NMD5YJR132W PAD1P33751 242 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
NMD5YJR132W IST2P38250 946 aa6.23□□□□□ -1.41
NMD5YJR132W YPC1P38298 316 aa6.23□□□□□ -1.41
NMD5YJR132W IKI1P38874 309 aa6.23□□□□□ -1.41
NMD5YJR132W YIL060WP40519 144 aa6.23□□□□□ -1.41
NMD5YJR132W BUD20Q08004 166 aaPredicted RBP6.23□□□□□ -1.41
NMD5YJR132W TRM11Q12463 433 aa6.23□□□□□ -1.41
NMD5YJR132W IXR1P33417 597 aa6.23□□□□□ -1.41
NMD5YJR132W MRPL24P36525 258 aaPredicted RBP6.23□□□□□ -1.41
NMD5YJR132W YBR013CP38215 129 aa6.23□□□□□ -1.41
NMD5YJR132W SAF1P38352 637 aa6.23□□□□□ -1.41
NMD5YJR132W MOB1P40484 314 aa6.23□□□□□ -1.41
NMD5YJR132W LSB3P43603 459 aaKnown RBP6.23□□□□□ -1.41
NMD5YJR132W GTF1P53260 183 aaPredicted RBP6.23□□□□□ -1.41
NMD5YJR132W ARK1P53974 638 aa6.23□□□□□ -1.41
NMD5YJR132W DIG2Q03373 323 aaKnown RBP6.23□□□□□ -1.41
NMD5YJR132W YMR206WQ03695 313 aa6.23□□□□□ -1.41
NMD5YJR132W YML037CQ03703 340 aa6.23□□□□□ -1.41
NMD5YJR132W ADH6Q04894 360 aaKnown RBP6.23□□□□□ -1.41
NMD5YJR132W BNA5Q05979 453 aa6.23□□□□□ -1.41
NMD5YJR132W PRP46Q12417 451 aaPredicted RBP6.23□□□□□ -1.41
NMD5YJR132W REP2P03872 296 aa6.22□□□□□ -1.41
NMD5YJR132W CTA1P15202 515 aa6.22□□□□□ -1.41
NMD5YJR132W ELO2P25358 347 aa6.22□□□□□ -1.41
NMD5YJR132W ERV15P38312 142 aa6.22□□□□□ -1.41
NMD5YJR132W MGA1P53050 456 aa6.22□□□□□ -1.41
NMD5YJR132W ABF2Q02486 183 aa6.22□□□□□ -1.41
NMD5YJR132W YHC1Q05900 231 aaKnown RBP6.22□□□□□ -1.41
NMD5YJR132W YPR071WQ12346 211 aa6.22□□□□□ -1.41
NMD5YJR132W FOL3Q12676 427 aaPredicted RBP6.22□□□□□ -1.41
NMD5YJR132W RPL9AP05738 191 aaKnown RBP6.22□□□□□ -1.41
NMD5YJR132W UTR4P32626 227 aa6.22□□□□□ -1.41
NMD5YJR132W RPL9BP51401 191 aaKnown RBP6.22□□□□□ -1.41
NMD5YJR132W OSH6Q02201 448 aa6.22□□□□□ -1.41
NMD5YJR132W GIP3Q03016 1276 aa6.22□□□□□ -1.41
NMD5YJR132W IPK1Q06667 281 aa6.22□□□□□ -1.41
NMD5YJR132W GPB1Q08886 897 aa6.22□□□□□ -1.41
NMD5YJR132W RDL1Q12305 139 aaKnown RBP6.22□□□□□ -1.41
NMD5YJR132W AIM45Q12480 344 aaKnown RBP6.22□□□□□ -1.41
NMD5YJR132W CHC1P22137 1653 aaKnown RBP6.22□□□□□ -1.41
NMD5YJR132W CYC3P06182 269 aa6.21□□□□□ -1.41
NMD5YJR132W SPS2P08459 502 aa6.21□□□□□ -1.41
NMD5YJR132W YPS1P32329 569 aa6.21□□□□□ -1.41
NMD5YJR132W YEF1P32622 495 aa6.21□□□□□ -1.41
NMD5YJR132W PRY2P36110 329 aa6.21□□□□□ -1.41
NMD5YJR132W SRP68P38687 599 aaKnown RBP6.21□□□□□ -1.41
NMD5YJR132W MRPL49P40858 161 aaPredicted RBP6.21□□□□□ -1.41
NMD5YJR132W CIN2P46670 268 aa6.21□□□□□ -1.41
NMD5YJR132W IRC8P47046 822 aa6.21□□□□□ -1.41
NMD5YJR132W PHO23P50947 330 aa6.21□□□□□ -1.41
NMD5YJR132W DUS1P53759 423 aaKnown RBP6.21□□□□□ -1.41
NMD5YJR132W DAD3P69850 94 aa6.21□□□□□ -1.41
NMD5YJR132W SIZ1Q04195 904 aa6.21□□□□□ -1.41
NMD5YJR132W HSP31Q04432 237 aa6.21□□□□□ -1.41
NMD5YJR132W MRPL35Q06678 367 aa6.21□□□□□ -1.41
NMD5YJR132W SPE4Q12455 300 aa6.21□□□□□ -1.41
NMD5YJR132W YCR075W-AQ3E830 75 aa6.21□□□□□ -1.41
NMD5YJR132W ETR1P38071 380 aa6.21□□□□□ -1.42
NMD5YJR132W TMA23Q03525 211 aa6.21□□□□□ -1.42
NMD5YJR132W EST2Q06163 884 aa6.21□□□□□ -1.42
NMD5YJR132W SAM4Q08985 325 aaKnown RBP6.21□□□□□ -1.42
NMD5YJR132W COX17Q12287 69 aa6.21□□□□□ -1.42
NMD5YJR132W STP22P25604 385 aa6.21□□□□□ -1.42
NMD5YJR132W GAT1P43574 510 aa6.21□□□□□ -1.42
NMD5YJR132W SPT20P50875 604 aa6.21□□□□□ -1.42
NMD5YJR132W GTR2P53290 341 aa6.21□□□□□ -1.42
NMD5YJR132W AIM6Q07716 390 aa6.21□□□□□ -1.42
NMD5YJR132W ADK1P07170 222 aaKnown RBP6.2□□□□□ -1.42
NMD5YJR132W MRPL32P25348 183 aa6.2□□□□□ -1.42
NMD5YJR132W SCD5P34758 872 aa6.2□□□□□ -1.42
NMD5YJR132W MTC4P38335 694 aaKnown RBP6.2□□□□□ -1.42
NMD5YJR132W AVT4P50944 713 aa6.2□□□□□ -1.42
NMD5YJR132W ARO8P53090 500 aaKnown RBP6.2□□□□□ -1.42
NMD5YJR132W SMP3Q04174 516 aa6.2□□□□□ -1.42
NMD5YJR132W SHH3Q04487 196 aa6.2□□□□□ -1.42
NMD5YJR132W PST2Q12335 198 aaKnown RBP6.2□□□□□ -1.42
NMD5YJR132W RDI1Q12434 202 aa6.2□□□□□ -1.42
NMD5YJR132W BI3Q9ZZW7 517 aa6.2□□□□□ -1.42
NMD5YJR132W YIL177CP40434 1758 aa6.2□□□□□ -1.42
NMD5YJR132W YJL225CP40889 1758 aa6.2□□□□□ -1.42
NMD5YJR132W ERG11P10614 530 aa6.2□□□□□ -1.42
NMD5YJR132W GAP1P19145 602 aaPredicted RBP6.2□□□□□ -1.42
NMD5YJR132W SEC22P22214 214 aa6.2□□□□□ -1.42
NMD5YJR132W POF1P25576 258 aa6.2□□□□□ -1.42
NMD5YJR132W COQ3P27680 312 aa6.2□□□□□ -1.42
NMD5YJR132W FRE2P36033 711 aa6.2□□□□□ -1.42
NMD5YJR132W MRPL36P36531 177 aa6.2□□□□□ -1.42
NMD5YJR132W HIS2P38635 335 aa6.2□□□□□ -1.42
NMD5YJR132W HEM14P40012 539 aa6.2□□□□□ -1.42
NMD5YJR132W MSO1P53604 210 aaKnown RBP6.2□□□□□ -1.42
NMD5YJR132W APS2Q00381 147 aa6.2□□□□□ -1.42
NMD5YJR132W TSA2Q04120 196 aa6.2□□□□□ -1.42
NMD5YJR132W YLR446WQ06204 433 aa6.2□□□□□ -1.42
NMD5YJR132W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
NMD5YJR132W YPT6Q99260 215 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms