RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C SDC1Q03323 175 aa3.36□□□□□ -1.87
OTU1YFL044C TVP15Q03860 143 aa3.36□□□□□ -1.87
OTU1YFL044C RRB1Q04225 511 aaKnown RBP3.36□□□□□ -1.87
OTU1YFL044C API2Q04413 109 aa3.36□□□□□ -1.87
OTU1YFL044C BUR2Q05949 395 aa3.36□□□□□ -1.87
OTU1YFL044C OSW1Q08692 278 aa3.36□□□□□ -1.87
OTU1YFL044C BSC1Q12140 328 aa3.36□□□□□ -1.87
OTU1YFL044C RPN5Q12250 445 aaKnown RBP3.36□□□□□ -1.87
OTU1YFL044C RDL1Q12305 139 aaKnown RBP3.36□□□□□ -1.87
OTU1YFL044C PFK27Q12471 397 aaPredicted RBP3.36□□□□□ -1.87
OTU1YFL044C YER145C-AA0A023PYF4 145 aa3.35□□□□□ -1.87
OTU1YFL044C RNA1P11745 407 aaKnown RBP3.35□□□□□ -1.87
OTU1YFL044C GAL3P13045 520 aa3.35□□□□□ -1.87
OTU1YFL044C KSS1P14681 368 aa3.35□□□□□ -1.87
OTU1YFL044C CTR86P25355 563 aa3.35□□□□□ -1.87
OTU1YFL044C EHD3P28817 500 aa3.35□□□□□ -1.87
OTU1YFL044C PUP2P32379 260 aa3.35□□□□□ -1.87
OTU1YFL044C SSE1P32589 693 aaKnown RBP3.35□□□□□ -1.87
OTU1YFL044C YME2P32843 850 aa3.35□□□□□ -1.87
OTU1YFL044C ANS1P38832 159 aa3.35□□□□□ -1.87
OTU1YFL044C PTH1P38876 190 aaKnown RBP3.35□□□□□ -1.87
OTU1YFL044C POP2P39008 433 aa3.35□□□□□ -1.87
OTU1YFL044C FAA2P39518 744 aa3.35□□□□□ -1.87
OTU1YFL044C AST2P39945 430 aaKnown RBP3.35□□□□□ -1.87
OTU1YFL044C ATF1P40353 525 aa3.35□□□□□ -1.87
OTU1YFL044C CAK1P43568 368 aaPredicted RBP3.35□□□□□ -1.87
OTU1YFL044C KAP120Q02932 1032 aa3.35□□□□□ -1.87
OTU1YFL044C FIN1Q03898 291 aa3.35□□□□□ -1.87
OTU1YFL044C ORM2Q06144 216 aa3.35□□□□□ -1.87
OTU1YFL044C PML1Q07930 204 aaPredicted RBP3.35□□□□□ -1.87
OTU1YFL044C GRE1Q08969 168 aa3.35□□□□□ -1.87
OTU1YFL044C YDL007C-AQ2V2Q0 85 aa3.35□□□□□ -1.87
OTU1YFL044C Q0297Q9ZZV8 51 aa3.35□□□□□ -1.87
OTU1YFL044C RAS2P01120 322 aaKnown RBP3.34□□□□□ -1.87
OTU1YFL044C HEM4P06174 275 aa3.34□□□□□ -1.87
OTU1YFL044C RAP1P11938 827 aa3.34□□□□□ -1.87
OTU1YFL044C UTR1P21373 530 aa3.34□□□□□ -1.87
OTU1YFL044C BOS1P25385 244 aa3.34□□□□□ -1.87
OTU1YFL044C RAD51P25454 400 aa3.34□□□□□ -1.87
OTU1YFL044C SEC17P32602 292 aa3.34□□□□□ -1.87
OTU1YFL044C HCS1P34243 683 aa3.34□□□□□ -1.87
OTU1YFL044C RPL32P38061 130 aaKnown RBP3.34□□□□□ -1.87
OTU1YFL044C YBR032WP38223 100 aa3.34□□□□□ -1.87
OTU1YFL044C TSC10P38342 320 aa3.34□□□□□ -1.87
OTU1YFL044C IMD2P38697 523 aaKnown RBP3.34□□□□□ -1.87
OTU1YFL044C BZZ1P38822 633 aa3.34□□□□□ -1.87
OTU1YFL044C NSG1P38837 291 aa3.34□□□□□ -1.87
OTU1YFL044C LYS12P40495 371 aaKnown RBP3.34□□□□□ -1.87
OTU1YFL044C AVT7P40501 490 aa3.34□□□□□ -1.87
OTU1YFL044C PAC10P48363 199 aa3.34□□□□□ -1.87
OTU1YFL044C IMD3P50095 523 aaKnown RBP3.34□□□□□ -1.87
OTU1YFL044C LSG1P53145 640 aaKnown RBP3.34□□□□□ -1.87
OTU1YFL044C ATP23P53722 227 aa3.34□□□□□ -1.87
OTU1YFL044C YDR476CQ03362 224 aa3.34□□□□□ -1.87
OTU1YFL044C URC2Q04411 772 aa3.34□□□□□ -1.87
OTU1YFL044C TPO3Q06451 622 aa3.34□□□□□ -1.87
OTU1YFL044C ARR1Q06596 294 aa3.34□□□□□ -1.87
OTU1YFL044C RAF1Q06891 181 aa3.34□□□□□ -1.87
OTU1YFL044C RSA1Q08932 381 aa3.34□□□□□ -1.87
OTU1YFL044C JLP1Q12358 412 aa3.34□□□□□ -1.87
OTU1YFL044C SPO24Q3E752 67 aa3.34□□□□□ -1.87
OTU1YFL044C YNL162W-AQ3E7A8 72 aa3.34□□□□□ -1.87
OTU1YFL044C SAS5Q99314 248 aa3.34□□□□□ -1.87
OTU1YFL044C MRP2P10663 115 aaPredicted RBP3.33□□□□□ -1.88
OTU1YFL044C RVS161P25343 265 aaKnown RBP3.33□□□□□ -1.88
OTU1YFL044C PHO91P27514 894 aa3.33□□□□□ -1.88
OTU1YFL044C MRPL39P36533 70 aa3.33□□□□□ -1.88
OTU1YFL044C DTR1P38125 572 aa3.33□□□□□ -1.88
OTU1YFL044C PRS3P38689 320 aaKnown RBP3.33□□□□□ -1.88
OTU1YFL044C ARN1P38731 627 aa3.33□□□□□ -1.88
OTU1YFL044C YHR177WP38867 453 aa3.33□□□□□ -1.88
OTU1YFL044C GAT2P40209 560 aa3.33□□□□□ -1.88
OTU1YFL044C GAB1P41733 394 aa3.33□□□□□ -1.88
OTU1YFL044C YNL010WP53981 241 aaKnown RBP3.33□□□□□ -1.88
OTU1YFL044C LGE1Q02796 332 aaKnown RBP3.33□□□□□ -1.88
OTU1YFL044C YPL039WQ03080 316 aa3.33□□□□□ -1.88
OTU1YFL044C RIM13Q03792 727 aa3.33□□□□□ -1.88
OTU1YFL044C MRPL1Q04599 285 aa3.33□□□□□ -1.88
OTU1YFL044C COQ11Q05892 277 aa3.33□□□□□ -1.88
OTU1YFL044C SSQ1Q05931 657 aaPredicted RBP3.33□□□□□ -1.88
OTU1YFL044C FRE3Q08905 711 aa3.33□□□□□ -1.88
OTU1YFL044C NOT5Q12514 560 aaPredicted RBP3.33□□□□□ -1.88
OTU1YFL044C FOL3Q12676 427 aaPredicted RBP3.33□□□□□ -1.88
OTU1YFL044C PRB1P09232 635 aa3.32□□□□□ -1.88
OTU1YFL044C RPL31BP0C2H9 113 aaKnown RBP3.32□□□□□ -1.88
OTU1YFL044C NUP1P20676 1076 aa3.32□□□□□ -1.88
OTU1YFL044C URE2P23202 354 aaKnown RBP3.32□□□□□ -1.88
OTU1YFL044C SCO1P23833 295 aa3.32□□□□□ -1.88
OTU1YFL044C NUP2P32499 720 aa3.32□□□□□ -1.88
OTU1YFL044C SLM4P38247 162 aa3.32□□□□□ -1.88
OTU1YFL044C CUS2P53830 285 aaPredicted RBP3.32□□□□□ -1.88
OTU1YFL044C EOS1P53938 366 aa3.32□□□□□ -1.88
OTU1YFL044C RSM23Q01163 450 aa3.32□□□□□ -1.88
OTU1YFL044C FAR8Q05040 523 aa3.32□□□□□ -1.88
OTU1YFL044C ATG38Q05789 226 aaKnown RBP3.32□□□□□ -1.88
OTU1YFL044C STE23Q06010 1027 aa3.32□□□□□ -1.88
OTU1YFL044C YEH2Q07950 538 aa3.32□□□□□ -1.88
OTU1YFL044C YLR036CQ07986 203 aa3.32□□□□□ -1.88
OTU1YFL044C YOL131WQ08270 108 aa3.32□□□□□ -1.88
OTU1YFL044C DCI1Q08558 271 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms