RNA–Protein interactions for RNA: YDR479C

PEX29, Transcript of Peroxisomal integral membrane peroxin, yeast

Gene PEX29, Length 1,665 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX29	YDR479C	RPS10B	P46784	105 aa	Known RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	ABM1	P47146	123 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	RPL4B	P49626	362 aa	Known RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	YGR012W	P53206	393 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	MPA43	P53583	542 aa	Predicted RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	DUS1	P53759	423 aa	Known RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	GPI15	P53961	229 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	CDC14	Q00684	551 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	MET14	Q02196	202 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	IRC15	Q02733	499 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	ERO1	Q03103	563 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	CUE4	Q04201	117 aa	Predicted RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	VBA4	Q04602	768 aa	Known RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	SDO1	Q07953	250 aa	Known RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	RPS10A	Q08745	105 aa	Predicted RBP	4.38	□□□□□ -1.71
PEX29	YDR479C	YLR099W-A	Q3E798	87 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	Q0010	Q9ZZX9	128 aa		4.38	□□□□□ -1.71
PEX29	YDR479C	HTB1	P02293	131 aa	Known RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	HTB2	P02294	131 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	ATP4	P05626	244 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
PEX29	YDR479C	PUT1	P09368	476 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	RNA15	P25299	296 aa	Predicted RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	MRP17	P28778	131 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	MSK1	P32048	576 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	YKU70	P32807	602 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	CLB6	P32943	380 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	SNC2	P33328	115 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	SHP1	P34223	423 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	TSA1	P34760	196 aa	Known RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	YBR284W	P38150	797 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	PHO88	P38264	188 aa	Predicted RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	EFM1	P38732	585 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	LRP1	P38801	184 aa	Known RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	UBA4	P38820	440 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	CTF8	P38877	133 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	CFD1	P40558	293 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	CAT5	P41735	233 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	POP1	P41812	875 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	OYE3	P41816	400 aa	Predicted RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	QRI7	P43122	407 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	RMD8	P43620	662 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	STE24	P47154	453 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	PUS4	P48567	403 aa	Known RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	ASI3	P53983	676 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
PEX29	YDR479C	MZM1	Q03429	123 aa	Predicted RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	RRP42	Q12277	265 aa	Predicted RBP	4.37	□□□□□ -1.71
PEX29	YDR479C	ERP4	Q12450	207 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	YJR112W-A	Q3E743	109 aa		4.37	□□□□□ -1.71
PEX29	YDR479C	HIS1	P00498	297 aa	Known RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	PMA1	P05030	918 aa	Known RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	RPL9A	P05738	191 aa	Known RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	ADH3	P07246	375 aa	Known RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	CKA1	P15790	372 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	HOP1	P20050	605 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	SEC62	P21825	274 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	EPT1	P22140	391 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	AHC2	P25649	128 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	RPD3	P32561	433 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	DOA1	P36037	715 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	YKR073C	P36153	106 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	AIM29	P36154	155 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	DHH1	P39517	506 aa	Known RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	EAF5	P39995	279 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	MXR1	P40029	184 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	SIP4	P46954	829 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	PFD1	P46988	109 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	RPA34	P47006	233 aa	Predicted RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	BUL1	P48524	976 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	RPL9B	P51401	191 aa	Known RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	PEX31	P53203	462 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	TIM21	P53220	239 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	FRE4	P53746	719 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	PRM1	P53835	661 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	NRK1	P53915	240 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	SLG1	P54867	378 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	SPP2	Q02521	185 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	NUP100	Q02629	959 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	HRD3	Q05787	833 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	BOP2	Q06150	570 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	ACK1	Q07622	623 aa	Predicted RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	HBT1	Q07653	1046 aa	Known RBP	4.36	□□□□□ -1.71
PEX29	YDR479C	SRN2	Q99176	213 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	YLR422W	Q06409	1932 aa		4.36	□□□□□ -1.71
PEX29	YDR479C	COX5A	P00424	153 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	CDC9	P04819	755 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	KIN28	P06242	306 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	RPL31A	P0C2H8	113 aa	Known RBP	4.35	□□□□□ -1.71
PEX29	YDR479C	RPL31B	P0C2H9	113 aa	Known RBP	4.35	□□□□□ -1.71
PEX29	YDR479C	AMD1	P15274	810 aa	Known RBP	4.35	□□□□□ -1.71
PEX29	YDR479C	PDA1	P16387	420 aa	Known RBP	4.35	□□□□□ -1.71
PEX29	YDR479C	AGP1	P25376	633 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	COQ3	P27680	312 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	SUR1	P33300	382 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	MTH1	P35198	433 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	BET3	P36149	193 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	SHG1	P38337	142 aa		4.35	□□□□□ -1.71
PEX29	YDR479C	ARO9	P38840	513 aa	Predicted RBP	4.35	□□□□□ -1.71
PEX29	YDR479C	AXL2	P38928	823 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms