RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C RSA1Q08932 381 aa2.37□□□□□ -2.03
SSN2YDR443C RKI1Q12189 258 aa2.37□□□□□ -2.03
SSN2YDR443C AHA1Q12449 350 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C HEM2P05373 342 aa2.37□□□□□ -2.03
SSN2YDR443C NAM2P11325 894 aa2.37□□□□□ -2.03
SSN2YDR443C TYR1P20049 452 aa2.37□□□□□ -2.03
SSN2YDR443C CAM1P29547 415 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C RAD5P32849 1169 aaPredicted RBP2.37□□□□□ -2.03
SSN2YDR443C LCP5P40079 357 aaPredicted RBP2.37□□□□□ -2.03
SSN2YDR443C YIA6P40556 373 aa2.37□□□□□ -2.03
SSN2YDR443C RPL10P41805 221 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C YJR111CP47148 283 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C RIF2Q06208 395 aa2.37□□□□□ -2.03
SSN2YDR443C CSM4Q08955 156 aa2.37□□□□□ -2.03
SSN2YDR443C RKM5Q12367 367 aa2.37□□□□□ -2.03
SSN2YDR443C LSO2Q3E772 92 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C HEM15P16622 393 aa2.36□□□□□ -2.03
SSN2YDR443C RNA15P25299 296 aaPredicted RBP2.36□□□□□ -2.03
SSN2YDR443C RBK1P25332 333 aa2.36□□□□□ -2.03
SSN2YDR443C YCR006CP25350 157 aa2.36□□□□□ -2.03
SSN2YDR443C SHC1P39000 512 aa2.36□□□□□ -2.03
SSN2YDR443C HAT2P39984 401 aa2.36□□□□□ -2.03
SSN2YDR443C EDC3P39998 551 aaKnown RBP2.36□□□□□ -2.03
SSN2YDR443C YJR012CP47087 207 aa2.36□□□□□ -2.03
SSN2YDR443C STP1Q00947 519 aa2.36□□□□□ -2.03
SSN2YDR443C TRM82Q03774 444 aa2.36□□□□□ -2.03
SSN2YDR443C VBA1Q04301 562 aa2.36□□□□□ -2.03
SSN2YDR443C HRD3Q05787 833 aa2.36□□□□□ -2.03
SSN2YDR443C ACF2Q12168 779 aa2.36□□□□□ -2.03
SSN2YDR443C SUT2Q12286 268 aa2.36□□□□□ -2.03
SSN2YDR443C HIS4P00815 799 aaKnown RBP2.36□□□□□ -2.03
SSN2YDR443C APL3P38065 1025 aa2.36□□□□□ -2.03
SSN2YDR443C ECM13P38195 257 aa2.36□□□□□ -2.03
SSN2YDR443C GRE3P38715 327 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SSN2YDR443C YGR201CP42936 225 aa2.36□□□□□ -2.03
SSN2YDR443C GUF1P46943 645 aa2.36□□□□□ -2.03
SSN2YDR443C OKP1P53298 406 aa2.36□□□□□ -2.03
SSN2YDR443C MKC7P53379 596 aa2.36□□□□□ -2.03
SSN2YDR443C SNU56Q03782 492 aaKnown RBP2.36□□□□□ -2.03
SSN2YDR443C HEM25Q07534 307 aa2.36□□□□□ -2.03
SSN2YDR443C YKL033W-AQ86ZR7 236 aa2.36□□□□□ -2.03
SSN2YDR443C BAR1P12630 587 aa2.36□□□□□ -2.03
SSN2YDR443C SPS100P13130 326 aa2.36□□□□□ -2.03
SSN2YDR443C STE4P18851 423 aa2.36□□□□□ -2.03
SSN2YDR443C PPH21P23594 369 aa2.36□□□□□ -2.03
SSN2YDR443C YIL060WP40519 144 aa2.36□□□□□ -2.03
SSN2YDR443C COS4P43542 379 aa2.36□□□□□ -2.03
SSN2YDR443C VMA10P48836 114 aaKnown RBP2.36□□□□□ -2.03
SSN2YDR443C ASI3P53983 676 aa2.36□□□□□ -2.03
SSN2YDR443C RAD50P12753 1312 aa2.35□□□□□ -2.03
SSN2YDR443C TCA17P32613 152 aa2.35□□□□□ -2.03
SSN2YDR443C GOS1P38736 223 aa2.35□□□□□ -2.03
SSN2YDR443C DDI1P40087 428 aa2.35□□□□□ -2.03
SSN2YDR443C YMR134WP40207 237 aa2.35□□□□□ -2.03
SSN2YDR443C APS3P47064 194 aa2.35□□□□□ -2.03
SSN2YDR443C EAF6P47128 113 aa2.35□□□□□ -2.03
SSN2YDR443C MGA1P53050 456 aa2.35□□□□□ -2.03
SSN2YDR443C NSA1P53136 463 aaPredicted RBP2.35□□□□□ -2.03
SSN2YDR443C MMS2P53152 137 aa2.35□□□□□ -2.03
SSN2YDR443C CDH1P53197 566 aa2.35□□□□□ -2.03
SSN2YDR443C YPL014WQ02606 381 aa2.35□□□□□ -2.03
SSN2YDR443C IRC4Q03036 179 aa2.35□□□□□ -2.03
SSN2YDR443C YOR114WQ12219 294 aa2.35□□□□□ -2.03
SSN2YDR443C ARP6Q12509 438 aa2.35□□□□□ -2.03
SSN2YDR443C DET1Q99288 334 aaKnown RBP2.35□□□□□ -2.03
SSN2YDR443C KGD2P19262 463 aaPredicted RBP2.35□□□□□ -2.03
SSN2YDR443C NUP1P20676 1076 aa2.35□□□□□ -2.03
SSN2YDR443C AIM17P23180 465 aaKnown RBP2.35□□□□□ -2.03
SSN2YDR443C YCR102CP25608 368 aa2.35□□□□□ -2.03
SSN2YDR443C QRI5P32344 111 aa2.35□□□□□ -2.03
SSN2YDR443C NUP2P32499 720 aa2.35□□□□□ -2.03
SSN2YDR443C UTP11P34247 250 aaPredicted RBP2.35□□□□□ -2.03
SSN2YDR443C YKL063CP35725 167 aa2.35□□□□□ -2.03
SSN2YDR443C YBR053CP38235 358 aa2.35□□□□□ -2.03
SSN2YDR443C PMT6P42934 759 aa2.35□□□□□ -2.03
SSN2YDR443C CTK3P46963 296 aaPredicted RBP2.35□□□□□ -2.03
SSN2YDR443C UBC11P52492 156 aa2.35□□□□□ -2.03
SSN2YDR443C PEX31P53203 462 aa2.35□□□□□ -2.03
SSN2YDR443C AKR2Q12013 749 aa2.35□□□□□ -2.03
SSN2YDR443C MRP2P10663 115 aaPredicted RBP2.35□□□□□ -2.03
SSN2YDR443C ARF2P19146 181 aaKnown RBP2.35□□□□□ -2.03
SSN2YDR443C AAT2P23542 418 aaKnown RBP2.35□□□□□ -2.03
SSN2YDR443C TRR1P29509 319 aaKnown RBP2.35□□□□□ -2.03
SSN2YDR443C MKK1P32490 508 aa2.35□□□□□ -2.03
SSN2YDR443C LOS1P33418 1100 aaPredicted RBP2.35□□□□□ -2.03
SSN2YDR443C CLG1P35190 452 aa2.35□□□□□ -2.03
SSN2YDR443C RCK2P38623 610 aa2.35□□□□□ -2.03
SSN2YDR443C MRPL49P40858 161 aaPredicted RBP2.35□□□□□ -2.03
SSN2YDR443C LST7P53237 242 aa2.35□□□□□ -2.03
SSN2YDR443C RCF2P53721 224 aa2.35□□□□□ -2.03
SSN2YDR443C SPR6Q01684 191 aa2.35□□□□□ -2.03
SSN2YDR443C ARO80Q04052 950 aa2.35□□□□□ -2.03
SSN2YDR443C GAT3Q07928 141 aa2.35□□□□□ -2.03
SSN2YDR443C YLR031WQ07978 186 aa2.35□□□□□ -2.03
SSN2YDR443C SLY1P22213 666 aa2.34□□□□□ -2.03
SSN2YDR443C IST2P38250 946 aa2.34□□□□□ -2.03
SSN2YDR443C BDH1P39714 382 aa2.34□□□□□ -2.03
SSN2YDR443C RBG1P39729 369 aa2.34□□□□□ -2.03
SSN2YDR443C SMB1P40018 196 aaKnown RBP2.34□□□□□ -2.03
SSN2YDR443C SHO1P40073 367 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 240.7 ms