RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W CIN2P46670 268 aa3.63□□□□□ -1.83
HPR1YDR138W YJR141WP47172 347 aaPredicted RBP3.63□□□□□ -1.83
HPR1YDR138W NSA1P53136 463 aaPredicted RBP3.63□□□□□ -1.83
HPR1YDR138W MAL12P53341 584 aa3.63□□□□□ -1.83
HPR1YDR138W SED5Q01590 340 aa3.63□□□□□ -1.83
HPR1YDR138W NUP116Q02630 1113 aa3.63□□□□□ -1.83
HPR1YDR138W SKI8Q02793 397 aaPredicted RBP3.63□□□□□ -1.83
HPR1YDR138W ENT5Q03769 411 aaKnown RBP3.63□□□□□ -1.83
HPR1YDR138W BNA7Q04066 261 aa3.63□□□□□ -1.83
HPR1YDR138W SAM4Q08985 325 aaKnown RBP3.63□□□□□ -1.83
HPR1YDR138W TDH2P00358 332 aaKnown RBP3.62□□□□□ -1.83
HPR1YDR138W ILV6P25605 309 aaKnown RBP3.62□□□□□ -1.83
HPR1YDR138W PEX3P28795 441 aa3.62□□□□□ -1.83
HPR1YDR138W TCA17P32613 152 aa3.62□□□□□ -1.83
HPR1YDR138W RIB5P38145 238 aa3.62□□□□□ -1.83
HPR1YDR138W SEC72P39742 193 aaKnown RBP3.62□□□□□ -1.83
HPR1YDR138W ALG8P40351 577 aa3.62□□□□□ -1.83
HPR1YDR138W YJR111CP47148 283 aaKnown RBP3.62□□□□□ -1.83
HPR1YDR138W CWC25P53854 179 aaKnown RBP3.62□□□□□ -1.83
HPR1YDR138W YMD8Q03697 442 aa3.62□□□□□ -1.83
HPR1YDR138W YDR248CQ03786 193 aa3.62□□□□□ -1.83
HPR1YDR138W YDR415CQ04033 374 aaPredicted RBP3.62□□□□□ -1.83
HPR1YDR138W RSA1Q08932 381 aa3.62□□□□□ -1.83
HPR1YDR138W YPL199CQ08954 240 aa3.62□□□□□ -1.83
HPR1YDR138W NUP157P40064 1391 aaKnown RBP3.62□□□□□ -1.83
HPR1YDR138W TRM3Q07527 1436 aa3.62□□□□□ -1.83
HPR1YDR138W KIN28P06242 306 aa3.61□□□□□ -1.83
HPR1YDR138W CDC23P16522 626 aa3.61□□□□□ -1.83
HPR1YDR138W HSP30P25619 332 aa3.61□□□□□ -1.83
HPR1YDR138W FUN26P31381 517 aa3.61□□□□□ -1.83
HPR1YDR138W PMU1P36069 295 aa3.61□□□□□ -1.83
HPR1YDR138W PRS4P38063 326 aaPredicted RBP3.61□□□□□ -1.83
HPR1YDR138W RRP3P38712 501 aaKnown RBP3.61□□□□□ -1.83
HPR1YDR138W YGL204CP53089 101 aa3.61□□□□□ -1.83
HPR1YDR138W TDA1Q03533 586 aa3.61□□□□□ -1.83
HPR1YDR138W YMR010WQ03687 405 aa3.61□□□□□ -1.83
HPR1YDR138W VBA1Q04301 562 aa3.61□□□□□ -1.83
HPR1YDR138W CSM4Q08955 156 aa3.61□□□□□ -1.83
HPR1YDR138W YPQ1Q12010 308 aa3.61□□□□□ -1.83
HPR1YDR138W BTS1Q12051 335 aa3.61□□□□□ -1.83
HPR1YDR138W MEX67Q99257 599 aaKnown RBP3.61□□□□□ -1.83
HPR1YDR138W SEY1Q99287 776 aa3.61□□□□□ -1.83
HPR1YDR138W RPO41P13433 1351 aaKnown RBP3.61□□□□□ -1.83
HPR1YDR138W HPR1P17629 752 aaKnown RBP3.61□□□□□ -1.83
HPR1YDR138W YSR3P23501 404 aa3.61□□□□□ -1.83
HPR1YDR138W AAT2P23542 418 aaKnown RBP3.61□□□□□ -1.83
HPR1YDR138W RBK1P25332 333 aa3.61□□□□□ -1.83
HPR1YDR138W RCK2P38623 610 aa3.61□□□□□ -1.83
HPR1YDR138W GRE3P38715 327 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
HPR1YDR138W RFC4P40339 323 aaKnown RBP3.61□□□□□ -1.83
HPR1YDR138W FMC1P40491 155 aa3.61□□□□□ -1.83
HPR1YDR138W GDS1P41913 522 aa3.61□□□□□ -1.83
HPR1YDR138W SAD1P43589 448 aa3.61□□□□□ -1.83
HPR1YDR138W YNL040WP53960 456 aaPredicted RBP3.61□□□□□ -1.83
HPR1YDR138W YPR091CQ06833 770 aa3.61□□□□□ -1.83
HPR1YDR138W AKR2Q12013 749 aa3.61□□□□□ -1.83
HPR1YDR138W IES3Q12345 250 aa3.61□□□□□ -1.83
HPR1YDR138W RPP0P05317 312 aaKnown RBP3.6□□□□□ -1.83
HPR1YDR138W RPL31AP0C2H8 113 aaKnown RBP3.6□□□□□ -1.83
HPR1YDR138W SNF6P18888 332 aa3.6□□□□□ -1.83
HPR1YDR138W PUT3P25502 979 aaPredicted RBP3.6□□□□□ -1.83
HPR1YDR138W YNK1P36010 153 aaKnown RBP3.6□□□□□ -1.83
HPR1YDR138W MRX3P38172 270 aa3.6□□□□□ -1.83
HPR1YDR138W RBL2P48606 106 aaKnown RBP3.6□□□□□ -1.83
HPR1YDR138W RIM13Q03792 727 aa3.6□□□□□ -1.83
HPR1YDR138W SNX41Q04053 625 aa3.6□□□□□ -1.83
HPR1YDR138W YDR222WQ04925 415 aa3.6□□□□□ -1.83
HPR1YDR138W YLR283WQ05867 314 aa3.6□□□□□ -1.83
HPR1YDR138W YOR387CQ08910 206 aa3.6□□□□□ -1.83
HPR1YDR138W GRE1Q08969 168 aa3.6□□□□□ -1.83
HPR1YDR138W RGT2Q12300 763 aa3.6□□□□□ -1.83
HPR1YDR138W WIP1Q2V2P8 89 aa3.6□□□□□ -1.83
HPR1YDR138W YCR043CP25361 127 aa3.6□□□□□ -1.83
HPR1YDR138W ACB1P31787 87 aa3.6□□□□□ -1.83
HPR1YDR138W YPC1P38298 316 aa3.6□□□□□ -1.83
HPR1YDR138W ARC40P38328 384 aaKnown RBP3.6□□□□□ -1.83
HPR1YDR138W YER121WP40076 114 aa3.6□□□□□ -1.83
HPR1YDR138W DIM1P41819 318 aaKnown RBP3.6□□□□□ -1.83
HPR1YDR138W MRX5P47007 382 aa3.6□□□□□ -1.83
HPR1YDR138W YJR030CP47101 745 aa3.6□□□□□ -1.83
HPR1YDR138W CCC1P47818 322 aa3.6□□□□□ -1.83
HPR1YDR138W NBP1P52919 319 aaPredicted RBP3.6□□□□□ -1.83
HPR1YDR138W COS10P52924 374 aa3.6□□□□□ -1.83
HPR1YDR138W NOP13P53883 403 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
HPR1YDR138W PRM15Q03262 622 aa3.6□□□□□ -1.83
HPR1YDR138W YLR031WQ07978 186 aa3.6□□□□□ -1.83
HPR1YDR138W FRE8Q12209 686 aa3.6□□□□□ -1.83
HPR1YDR138W MCT1Q12283 360 aa3.6□□□□□ -1.83
HPR1YDR138W BBP1Q12365 385 aa3.6□□□□□ -1.83
HPR1YDR138W TRM732Q03496 1420 aa3.6□□□□□ -1.83
HPR1YDR138W SMC4Q12267 1418 aa3.6□□□□□ -1.83
HPR1YDR138W RPS14AP06367 137 aaKnown RBP3.59□□□□□ -1.83
HPR1YDR138W COS2P0CX12 379 aa3.59□□□□□ -1.83
HPR1YDR138W COS3P0CX13 379 aa3.59□□□□□ -1.83
HPR1YDR138W CBS2P14905 389 aa3.59□□□□□ -1.83
HPR1YDR138W CPR4P25334 318 aa3.59□□□□□ -1.83
HPR1YDR138W PMT2P31382 759 aa3.59□□□□□ -1.83
HPR1YDR138W AGA1P32323 725 aa3.59□□□□□ -1.83
HPR1YDR138W SKG6P32900 734 aaPredicted RBP3.59□□□□□ -1.83
HPR1YDR138W MRPL6P32904 214 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms