RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W DOA4P32571 926 aa8.58□□□□□ -1.04
SED1YDR077W MIT1P40002 666 aa8.58□□□□□ -1.04
SED1YDR077W NAS2P40555 220 aa8.58□□□□□ -1.04
SED1YDR077W OCA1P50946 238 aaPredicted RBP8.58□□□□□ -1.04
SED1YDR077W PMT5P52867 743 aa8.58□□□□□ -1.04
SED1YDR077W MRH4P53166 561 aa8.58□□□□□ -1.04
SED1YDR077W COX20Q04935 205 aa8.58□□□□□ -1.04
SED1YDR077W MDM30Q05930 598 aa8.58□□□□□ -1.04
SED1YDR077W RRG7Q08774 242 aaPredicted RBP8.58□□□□□ -1.04
SED1YDR077W RTN2Q12443 393 aa8.58□□□□□ -1.04
SED1YDR077W ACC1Q00955 2233 aaKnown RBP8.57□□□□□ -1.04
SED1YDR077W PDE2P06776 526 aa8.57□□□□□ -1.04
SED1YDR077W BOS1P25385 244 aa8.57□□□□□ -1.04
SED1YDR077W EHD3P28817 500 aa8.57□□□□□ -1.04
SED1YDR077W SPT14P32363 452 aa8.57□□□□□ -1.04
SED1YDR077W MTH1P35198 433 aa8.57□□□□□ -1.04
SED1YDR077W TMA19P35691 167 aaKnown RBP8.57□□□□□ -1.04
SED1YDR077W YKR073CP36153 106 aa8.57□□□□□ -1.04
SED1YDR077W PMT6P42934 759 aa8.57□□□□□ -1.04
SED1YDR077W ARO8P53090 500 aaKnown RBP8.57□□□□□ -1.04
SED1YDR077W IMO32P53219 342 aa8.57□□□□□ -1.04
SED1YDR077W SAY1P53324 424 aa8.57□□□□□ -1.04
SED1YDR077W SNX41Q04053 625 aa8.57□□□□□ -1.04
SED1YDR077W BAG7Q12128 409 aa8.57□□□□□ -1.04
SED1YDR077W YOR343CQ12484 108 aa8.57□□□□□ -1.04
SED1YDR077W COX9P07255 59 aa8.56□□□□□ -1.04
SED1YDR077W STE12P13574 688 aa8.56□□□□□ -1.04
SED1YDR077W STE50P25344 346 aa8.56□□□□□ -1.04
SED1YDR077W CCZ1P38273 704 aa8.56□□□□□ -1.04
SED1YDR077W YER010CP40011 234 aa8.56□□□□□ -1.04
SED1YDR077W PKP1P40530 394 aa8.56□□□□□ -1.04
SED1YDR077W PAM16P42949 149 aa8.56□□□□□ -1.04
SED1YDR077W BRR6P53062 197 aa8.56□□□□□ -1.04
SED1YDR077W PFA5Q03289 374 aa8.56□□□□□ -1.04
SED1YDR077W CGI121Q03705 181 aaKnown RBP8.56□□□□□ -1.04
SED1YDR077W YMR252CQ04814 134 aa8.56□□□□□ -1.04
SED1YDR077W YPR109WQ06104 294 aa8.56□□□□□ -1.04
SED1YDR077W YPL199CQ08954 240 aa8.56□□□□□ -1.04
SED1YDR077W YRA1Q12159 226 aaKnown RBP8.56□□□□□ -1.04
SED1YDR077W YOR032W-AQ8TGS1 66 aa8.56□□□□□ -1.04
SED1YDR077W CYT1P07143 309 aa8.55□□□□□ -1.04
SED1YDR077W HOM6P31116 359 aaKnown RBP8.55□□□□□ -1.04
SED1YDR077W PAU2P32612 120 aa8.55□□□□□ -1.04
SED1YDR077W GRE3P38715 327 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
SED1YDR077W SOL3P38858 249 aa8.55□□□□□ -1.04
SED1YDR077W POP1P41812 875 aa8.55□□□□□ -1.04
SED1YDR077W APM1Q00776 475 aaPredicted RBP8.55□□□□□ -1.04
SED1YDR077W MSS11Q03825 758 aa8.55□□□□□ -1.04
SED1YDR077W HLR1Q04429 423 aa8.55□□□□□ -1.04
SED1YDR077W MRX8Q05473 314 aa8.55□□□□□ -1.04
SED1YDR077W RBS1Q05672 457 aaKnown RBP8.55□□□□□ -1.04
SED1YDR077W LUC7Q07508 261 aaPredicted RBP8.55□□□□□ -1.04
SED1YDR077W TIR4Q12218 487 aaPredicted RBP8.55□□□□□ -1.04
SED1YDR077W FRE7Q12333 620 aa8.55□□□□□ -1.04
SED1YDR077W GCN4P03069 281 aa8.54□□□□□ -1.04
SED1YDR077W YHR214C-DP0CX93 97 aa8.54□□□□□ -1.04
SED1YDR077W SCO1P23833 295 aa8.54□□□□□ -1.04
SED1YDR077W BUD23P25627 275 aaPredicted RBP8.54□□□□□ -1.04
SED1YDR077W SRP102P36057 244 aaPredicted RBP8.54□□□□□ -1.04
SED1YDR077W LEU5P38702 357 aa8.54□□□□□ -1.04
SED1YDR077W RPE1P46969 238 aa8.54□□□□□ -1.04
SED1YDR077W IRC18P47056 224 aa8.54□□□□□ -1.04
SED1YDR077W MSE1P48525 536 aa8.54□□□□□ -1.04
SED1YDR077W PDR16P53860 351 aaKnown RBP8.54□□□□□ -1.04
SED1YDR077W ATG21Q02887 496 aa8.54□□□□□ -1.04
SED1YDR077W NUP53Q03790 475 aa8.54□□□□□ -1.04
SED1YDR077W YPR147CQ06522 304 aaKnown RBP8.54□□□□□ -1.04
SED1YDR077W TSR2Q06672 205 aaKnown RBP8.54□□□□□ -1.04
SED1YDR077W SEN1Q00416 2231 aaKnown RBP8.54□□□□□ -1.04
SED1YDR077W CPR2P23285 205 aa8.53□□□□□ -1.04
SED1YDR077W ANR2P36090 516 aaPredicted RBP8.53□□□□□ -1.04
SED1YDR077W PEX32P38292 413 aa8.53□□□□□ -1.04
SED1YDR077W PGU1P47180 361 aa8.53□□□□□ -1.04
SED1YDR077W CCC1P47818 322 aa8.53□□□□□ -1.04
SED1YDR077W YGR126WP53274 230 aa8.53□□□□□ -1.04
SED1YDR077W ERV29P53337 310 aa8.53□□□□□ -1.04
SED1YDR077W YPL039WQ03080 316 aa8.53□□□□□ -1.04
SED1YDR077W RSM10Q03201 203 aa8.53□□□□□ -1.04
SED1YDR077W SCS7Q03529 384 aa8.53□□□□□ -1.04
SED1YDR077W SSY1Q03770 852 aa8.53□□□□□ -1.04
SED1YDR077W BNA7Q04066 261 aa8.53□□□□□ -1.04
SED1YDR077W RDL2Q08742 149 aaKnown RBP8.53□□□□□ -1.04
SED1YDR077W YOR283WQ12040 230 aaKnown RBP8.53□□□□□ -1.04
SED1YDR077W CDC9P04819 755 aa8.52□□□□□ -1.05
SED1YDR077W ADK1P07170 222 aaKnown RBP8.52□□□□□ -1.05
SED1YDR077W PBS2P08018 668 aa8.52□□□□□ -1.05
SED1YDR077W RPS18AP0CX55 146 aaKnown RBP8.52□□□□□ -1.05
SED1YDR077W RPS18BP0CX56 146 aaPredicted RBP8.52□□□□□ -1.05
SED1YDR077W GCN3P14741 305 aa8.52□□□□□ -1.05
SED1YDR077W PPA2P28239 310 aa8.52□□□□□ -1.05
SED1YDR077W ITR1P30605 584 aa8.52□□□□□ -1.05
SED1YDR077W SFK1P35735 353 aa8.52□□□□□ -1.05
SED1YDR077W REE1P40893 198 aa8.52□□□□□ -1.05
SED1YDR077W DOC1P53068 250 aa8.52□□□□□ -1.05
SED1YDR077W TPN1P53099 579 aa8.52□□□□□ -1.05
SED1YDR077W MIX14Q04341 121 aa8.52□□□□□ -1.05
SED1YDR077W DFG5Q05031 458 aa8.52□□□□□ -1.05
SED1YDR077W TPO3Q06451 622 aa8.52□□□□□ -1.05
SED1YDR077W MRPL35Q06678 367 aa8.52□□□□□ -1.05
SED1YDR077W ATG41Q12048 136 aa8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms